Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
CLCN3P51790 RPL39P29-201ENST00000447779 157 ntBASIC2.57□□□□□ -2
CLCN3P51790 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.57□□□□□ -2
CLCN3P51790 AL513124.1-201ENST00000450410 614 ntBASIC2.57□□□□□ -2
CLCN3P51790 RPL30P15-201ENST00000457129 321 ntBASIC2.57□□□□□ -2
CLCN3P51790 RPS29P27-201ENST00000463711 170 ntBASIC2.57□□□□□ -2
CLCN3P51790 RPS29P21-201ENST00000496272 170 ntBASIC2.57□□□□□ -2
CLCN3P51790 AC023141.11-201ENST00000508864 202 ntBASIC2.57□□□□□ -2
CLCN3P51790 RN7SKP40-201ENST00000517211 242 ntBASIC2.57□□□□□ -2
CLCN3P51790 SNRPGP18-201ENST00000553000 214 ntBASIC2.57□□□□□ -2
CLCN3P51790 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CLCN3P51790 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
CLCN3P51790 AP001836.1-201ENST00000604675 523 ntBASIC2.57□□□□□ -2
CLCN3P51790 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.57□□□□□ -2
CLCN3P51790 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CLCN3P51790 AC241585.2-209ENST00000638217 143 ntBASIC2.57□□□□□ -2
CLCN3P51790 AP000560.1-201ENST00000624150 1937 ntBASIC2.57□□□□□ -2
CLCN3P51790 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CLCN3P51790 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
CLCN3P51790 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLCN3P51790 MIR21-201ENST00000362134 72 ntBASIC2.56□□□□□ -2
CLCN3P51790 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
CLCN3P51790 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
CLCN3P51790 Y_RNA.463-201ENST00000384271 102 ntBASIC2.56□□□□□ -2
CLCN3P51790 RNU6-692P-201ENST00000384496 107 ntBASIC2.56□□□□□ -2
CLCN3P51790 MIR544A-201ENST00000384855 91 ntBASIC2.56□□□□□ -2
CLCN3P51790 MIR186-201ENST00000384988 86 ntBASIC2.56□□□□□ -2
CLCN3P51790 AL590004.1-201ENST00000405321 300 ntBASIC2.56□□□□□ -2
CLCN3P51790 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
CLCN3P51790 RPL23AP95-201ENST00000426806 265 ntBASIC2.56□□□□□ -2
CLCN3P51790 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.56□□□□□ -2
CLCN3P51790 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
CLCN3P51790 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.56□□□□□ -2
CLCN3P51790 AL163540.1-201ENST00000485382 386 ntBASIC2.56□□□□□ -2
CLCN3P51790 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.56□□□□□ -2
CLCN3P51790 RNU6-976P-201ENST00000516086 111 ntBASIC2.56□□□□□ -2
CLCN3P51790 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.56□□□□□ -2
CLCN3P51790 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.56□□□□□ -2
CLCN3P51790 AC019193.3-201ENST00000609144 554 ntBASIC2.56□□□□□ -2
CLCN3P51790 AC097372.5-201ENST00000623665 376 ntBASIC2.56□□□□□ -2
CLCN3P51790 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
CLCN3P51790 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLCN3P51790 RNU6-1285P-201ENST00000363480 105 ntBASIC2.55□□□□□ -2
CLCN3P51790 RNU6-1210P-201ENST00000363775 107 ntBASIC2.55□□□□□ -2
CLCN3P51790 Y_RNA.252-201ENST00000364556 101 ntBASIC2.55□□□□□ -2
CLCN3P51790 SNORD32A-201ENST00000364805 84 ntBASIC2.55□□□□□ -2
CLCN3P51790 Y_RNA.496-201ENST00000384444 101 ntBASIC2.55□□□□□ -2
CLCN3P51790 RNU6-738P-201ENST00000384531 106 ntBASIC2.55□□□□□ -2
CLCN3P51790 RN7SKP61-201ENST00000410642 295 ntBASIC2.55□□□□□ -2
CLCN3P51790 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
CLCN3P51790 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.55□□□□□ -2
CLCN3P51790 AC078809.1-201ENST00000427601 140 ntBASIC2.55□□□□□ -2
CLCN3P51790 AC018634.1-201ENST00000437554 401 ntBASIC2.55□□□□□ -2
CLCN3P51790 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
CLCN3P51790 PCMTD1P1-201ENST00000455560 355 ntBASIC2.55□□□□□ -2
CLCN3P51790 RPL9P9-202ENST00000466501 579 ntBASIC2.55□□□□□ -2
CLCN3P51790 AC090096.1-201ENST00000489168 390 ntBASIC2.55□□□□□ -2
CLCN3P51790 AC022447.4-201ENST00000504053 364 ntBASIC2.55□□□□□ -2
CLCN3P51790 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.55□□□□□ -2
CLCN3P51790 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
CLCN3P51790 MIR5007-201ENST00000583098 95 ntBASIC2.55□□□□□ -2
CLCN3P51790 AC078795.3-201ENST00000602913 472 ntBASIC2.55□□□□□ -2
CLCN3P51790 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.55□□□□□ -2
CLCN3P51790 AC133104.2-201ENST00000615272 193 ntBASIC2.55□□□□□ -2
CLCN3P51790 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLCN3P51790 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.54□□□□□ -2
CLCN3P51790 RNU6-655P-201ENST00000362858 107 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU6-227P-201ENST00000362865 103 ntBASIC2.54□□□□□ -2
CLCN3P51790 SNORA63C-201ENST00000364578 129 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU6-1317P-201ENST00000364582 104 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
CLCN3P51790 SNORA33.2-201ENST00000365413 134 ntBASIC2.54□□□□□ -2
CLCN3P51790 SNORA22B-201ENST00000383876 138 ntBASIC2.54□□□□□ -2
CLCN3P51790 Y_RNA.445-201ENST00000384168 102 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU6-331P-201ENST00000384724 107 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
CLCN3P51790 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU6-1140P-201ENST00000410517 106 ntBASIC2.54□□□□□ -2
CLCN3P51790 AIMP1P2-201ENST00000425294 312 ntBASIC2.54□□□□□ -2
CLCN3P51790 AL356320.1-201ENST00000429616 163 ntBASIC2.54□□□□□ -2
CLCN3P51790 AL121890.1-201ENST00000435457 205 ntBASIC2.54□□□□□ -2
CLCN3P51790 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
CLCN3P51790 AL353705.4-201ENST00000449661 238 ntBASIC2.54□□□□□ -2
CLCN3P51790 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.54□□□□□ -2
CLCN3P51790 RNU2-53P-201ENST00000516257 147 ntBASIC2.54□□□□□ -2
CLCN3P51790 SCARNA16.2-201ENST00000516520 172 ntBASIC2.54□□□□□ -2
CLCN3P51790 RNU6-612P-201ENST00000516909 102 ntBASIC2.54□□□□□ -2
CLCN3P51790 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.54□□□□□ -2
CLCN3P51790 MIR5696-201ENST00000578474 85 ntBASIC2.54□□□□□ -2
CLCN3P51790 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
CLCN3P51790 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
CLCN3P51790 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLCN3P51790 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.54□□□□□ -2
CLCN3P51790 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
CLCN3P51790 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CLCN3P51790 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN3P51790 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN3P51790 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN3P51790 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLCN3P51790 Y_RNA.28-201ENST00000362554 111 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms