Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU6-508P-201ENST00000363231 103 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 RNU6-1210P-201ENST00000363775 107 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 MIR192-201ENST00000384915 110 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 MIR93-201ENST00000385024 80 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 MIR147B-201ENST00000390185 80 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 RNU2-70P-201ENST00000410718 179 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 AC023141.4-201ENST00000412031 328 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 AC126124.2-201ENST00000413542 321 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 AL135786.1-201ENST00000415892 214 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF144AP50876 HLA-N-201ENST00000437516 135 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 RBMY2UP-201ENST00000453474 324 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 RPL35AP15-201ENST00000468042 339 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 RPL36AP21-201ENST00000490372 323 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF144AP50876 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
RNF144AP50876 RN7SKP289-201ENST00000517244 295 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 CYP4A43P-201ENST00000568156 121 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 AC012493.2-201ENST00000595083 291 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RNF144AP50876 AP000346.3-201ENST00000622821 210 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
RNF144AP50876 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
RNF144AP50876 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF144AP50876 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF144AP50876 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF144AP50876 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
RNF144AP50876 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF144AP50876 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF144AP50876 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF144AP50876 RNU6-271P-201ENST00000363858 105 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 SNORA51.4-201ENST00000364993 124 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 SNORA12-201ENST00000391162 147 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 RNA5SP104-201ENST00000410989 118 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AL732292.1-201ENST00000426692 226 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF144AP50876 snoU13.28-201ENST00000459235 104 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF144AP50876 AC005921.1-201ENST00000510589 286 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 RNU6-412P-201ENST00000516434 106 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AC026241.1-201ENST00000517873 2142 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF144AP50876 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF144AP50876 RPL17P51-201ENST00000605218 238 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AL021707.8-201ENST00000609428 183 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 MIR6891-201ENST00000618788 93 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF144AP50876 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF144AP50876 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF144AP50876 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF144AP50876 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF144AP50876 MTND5P18-201ENST00000445624 1801 ntBASIC4.05□□□□□ -1.76
RNF144AP50876 AL353746.1-201ENST00000566293 6881 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF144AP50876 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RNF144AP50876 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
RNF144AP50876 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF144AP50876 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF144AP50876 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF144AP50876 AL356292.1-201ENST00000283110 373 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 MIR331-201ENST00000362302 94 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 SNORA27.1-201ENST00000362604 124 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 MIRLET7F2-201ENST00000385277 83 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 MIR1911-201ENST00000410783 80 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 CRYBB2P1-203ENST00000415709 538 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 AC004552.1-201ENST00000419089 348 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 RNA5SP310-201ENST00000459084 116 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 RPS26P3-201ENST00000470205 348 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 RN7SL738P-201ENST00000470264 297 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 RPS26P55-201ENST00000471178 356 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 AC090543.2-201ENST00000483963 348 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 AC004057.1-201ENST00000485827 348 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 RNA5SP153-201ENST00000516498 76 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 MIR3609-201ENST00000582661 80 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 AC008745.1-201ENST00000604064 271 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 AP005019.3-201ENST00000620418 560 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RNF144AP50876 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF144AP50876 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF144AP50876 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF144AP50876 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF144AP50876 MFSD8-216ENST00000641147 4009 ntBASIC4.04□□□□□ -1.76
RNF144AP50876 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF144AP50876 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF144AP50876 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF144AP50876 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
RNF144AP50876 RNA5SP443-201ENST00000363083 132 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 DYNLT3P1-201ENST00000378574 347 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 RNU6-106P-201ENST00000384405 107 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 RPL21P10-201ENST00000463521 490 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 HMGN2P9-201ENST00000476875 229 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 MIR4330-201ENST00000579077 105 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 MIR4715-201ENST00000584117 79 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 RNU1-30P-201ENST00000606575 163 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms