Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC107032.1-201ENST00000485945 480 ntBASIC2.32□□□□□ -2.04
HADHAP40939 PTP4A1P4-201ENST00000512479 322 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.32□□□□□ -2.04
HADHAP40939 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.32□□□□□ -2.04
HADHAP40939 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.32□□□□□ -2.04
HADHAP40939 AC107953.1-201ENST00000522216 297 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.32□□□□□ -2.04
HADHAP40939 AC233702.2-202ENST00000562547 291 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.32□□□□□ -2.04
HADHAP40939 MIR3942-201ENST00000585264 109 ntBASIC2.32□□□□□ -2.04
HADHAP40939 POLR3GP2-201ENST00000588366 668 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AC124303.1-201ENST00000605703 360 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
HADHAP40939 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HADHAP40939 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
HADHAP40939 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HADHAP40939 AC008555.8-201ENST00000623602 2168 ntBASIC2.32□□□□□ -2.04
HADHAP40939 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HADHAP40939 RNU6-1159P-201ENST00000362933 107 ntBASIC2.31□□□□□ -2.04
HADHAP40939 Y_RNA.99-201ENST00000363138 105 ntBASIC2.31□□□□□ -2.04
HADHAP40939 HMGN2P39-201ENST00000398005 273 ntBASIC2.31□□□□□ -2.04
HADHAP40939 MIR208B-201ENST00000401172 77 ntBASIC2.31□□□□□ -2.04
HADHAP40939 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
HADHAP40939 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
HADHAP40939 EIF4EP2-201ENST00000422816 654 ntBASIC2.31□□□□□ -2.04
HADHAP40939 MTCO3P46-201ENST00000425787 232 ntBASIC2.31□□□□□ -2.04
HADHAP40939 AL356320.1-201ENST00000429616 163 ntBASIC2.31□□□□□ -2.04
HADHAP40939 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
HADHAP40939 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
HADHAP40939 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.31□□□□□ -2.04
HADHAP40939 ACA59.1-201ENST00000515966 143 ntBASIC2.31□□□□□ -2.04
HADHAP40939 RNU6-965P-201ENST00000516721 96 ntBASIC2.31□□□□□ -2.04
HADHAP40939 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.31□□□□□ -2.04
HADHAP40939 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.31□□□□□ -2.04
HADHAP40939 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.31□□□□□ -2.04
HADHAP40939 AC109446.1-201ENST00000566172 220 ntBASIC2.31□□□□□ -2.04
HADHAP40939 AC019193.3-201ENST00000609144 554 ntBASIC2.31□□□□□ -2.04
HADHAP40939 AL160394.1-201ENST00000624765 724 ntBASIC2.31□□□□□ -2.04
HADHAP40939 ZNF658B-202ENST00000615961 3375 ntBASIC2.31□□□□□ -2.04
HADHAP40939 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HADHAP40939 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
HADHAP40939 Y_RNA.86-201ENST00000363020 111 ntBASIC2.3□□□□□ -2.04
HADHAP40939 RNU6-234P-201ENST00000365229 104 ntBASIC2.3□□□□□ -2.04
HADHAP40939 SNORA32.2-201ENST00000384049 122 ntBASIC2.3□□□□□ -2.04
HADHAP40939 SNORA36A-201ENST00000384221 132 ntBASIC2.3□□□□□ -2.04
HADHAP40939 MIR517A-201ENST00000385001 87 ntBASIC2.3□□□□□ -2.04
HADHAP40939 RNU6-1148P-201ENST00000410992 104 ntBASIC2.3□□□□□ -2.04
HADHAP40939 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
HADHAP40939 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.3□□□□□ -2.04
HADHAP40939 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
HADHAP40939 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.3□□□□□ -2.04
HADHAP40939 ANXA2P1-201ENST00000505539 926 ntBASIC2.3□□□□□ -2.04
HADHAP40939 AC008549.1-201ENST00000512900 643 ntBASIC2.3□□□□□ -2.04
HADHAP40939 RNU1-41P-201ENST00000516161 162 ntBASIC2.3□□□□□ -2.04
HADHAP40939 RNU1-48P-201ENST00000516400 162 ntBASIC2.3□□□□□ -2.04
HADHAP40939 RNU6-566P-201ENST00000516790 107 ntBASIC2.3□□□□□ -2.04
HADHAP40939 RNA5SP454-201ENST00000517231 127 ntBASIC2.3□□□□□ -2.04
HADHAP40939 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
HADHAP40939 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.3□□□□□ -2.04
HADHAP40939 AC009248.2-201ENST00000619826 254 ntBASIC2.3□□□□□ -2.04
HADHAP40939 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
HADHAP40939 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HADHAP40939 AC233981.2-201ENST00000611524 1614 ntBASIC2.3□□□□□ -2.04
HADHAP40939 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
HADHAP40939 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
HADHAP40939 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.29□□□□□ -2.04
HADHAP40939 Y_RNA.151-201ENST00000363566 112 ntBASIC2.29□□□□□ -2.04
HADHAP40939 Y_RNA.248-201ENST00000364501 109 ntBASIC2.29□□□□□ -2.04
HADHAP40939 RNU6-596P-201ENST00000365395 98 ntBASIC2.29□□□□□ -2.04
HADHAP40939 RNU6-378P-201ENST00000384324 107 ntBASIC2.29□□□□□ -2.04
HADHAP40939 SNORD14D-201ENST00000384390 87 ntBASIC2.29□□□□□ -2.04
HADHAP40939 SNORA12-201ENST00000391162 147 ntBASIC2.29□□□□□ -2.04
HADHAP40939 RNA5SP494-201ENST00000410653 129 ntBASIC2.29□□□□□ -2.04
HADHAP40939 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.29□□□□□ -2.04
HADHAP40939 AL590632.1-201ENST00000424289 371 ntBASIC2.29□□□□□ -2.04
HADHAP40939 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.29□□□□□ -2.04
HADHAP40939 MTND1P17-201ENST00000448961 204 ntBASIC2.29□□□□□ -2.04
HADHAP40939 MTCO2P30-201ENST00000503662 364 ntBASIC2.29□□□□□ -2.04
HADHAP40939 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.29□□□□□ -2.04
HADHAP40939 AC046134.1-201ENST00000514454 666 ntBASIC2.29□□□□□ -2.04
HADHAP40939 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.29□□□□□ -2.04
HADHAP40939 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
HADHAP40939 AC026470.2-201ENST00000561492 181 ntBASIC2.29□□□□□ -2.04
HADHAP40939 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.29□□□□□ -2.04
HADHAP40939 MIR3976-201ENST00000606807 139 ntBASIC2.29□□□□□ -2.04
HADHAP40939 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.29□□□□□ -2.04
HADHAP40939 AL359314.1-201ENST00000616913 261 ntBASIC2.29□□□□□ -2.04
HADHAP40939 SDR42E1P4-201ENST00000620894 481 ntBASIC2.29□□□□□ -2.04
HADHAP40939 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.29□□□□□ -2.04
HADHAP40939 AL359697.1-201ENST00000624879 587 ntBASIC2.29□□□□□ -2.04
HADHAP40939 MIR1248-201ENST00000629190 106 ntBASIC2.29□□□□□ -2.04
HADHAP40939 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.29□□□□□ -2.04
HADHAP40939 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HADHAP40939 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
HADHAP40939 Y_RNA.301-201ENST00000364990 103 ntBASIC2.28□□□□□ -2.04
HADHAP40939 SNORA3.2-201ENST00000408221 125 ntBASIC2.28□□□□□ -2.04
HADHAP40939 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.28□□□□□ -2.04
HADHAP40939 AL121890.1-201ENST00000435457 205 ntBASIC2.28□□□□□ -2.04
HADHAP40939 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.28□□□□□ -2.04
HADHAP40939 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms