Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RPS4XP2-201ENST00000458402 793 ntBASIC4.74□□□□□ -1.65
CLCN1P35523 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN1P35523 RNU2-56P-201ENST00000516826 190 ntBASIC4.74□□□□□ -1.65
CLCN1P35523 AP001328.1-201ENST00000528550 176 ntBASIC4.74□□□□□ -1.65
CLCN1P35523 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN1P35523 AL670379.2-201ENST00000604983 252 ntBASIC4.74□□□□□ -1.65
CLCN1P35523 RPL17P51-201ENST00000605218 238 ntBASIC4.74□□□□□ -1.65
CLCN1P35523 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN1P35523 AL513302.2-201ENST00000562313 1842 ntBASIC4.74□□□□□ -1.65
CLCN1P35523 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN1P35523 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN1P35523 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN1P35523 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN1P35523 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN1P35523 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.73□□□□□ -1.65
CLCN1P35523 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN1P35523 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN1P35523 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCN1P35523 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN1P35523 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLCN1P35523 MIR586-201ENST00000385035 97 ntBASIC4.73□□□□□ -1.65
CLCN1P35523 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCN1P35523 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCN1P35523 AL162591.2-201ENST00000449634 317 ntBASIC4.73□□□□□ -1.65
CLCN1P35523 RN7SL459P-201ENST00000481078 302 ntBASIC4.73□□□□□ -1.65
CLCN1P35523 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.73□□□□□ -1.65
CLCN1P35523 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
CLCN1P35523 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.73□□□□□ -1.65
CLCN1P35523 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.73□□□□□ -1.65
CLCN1P35523 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN1P35523 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN1P35523 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCN1P35523 RNU6-834P-201ENST00000362367 110 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 Y_RNA.124-201ENST00000363339 93 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 RNU6-153P-201ENST00000364422 104 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 Y_RNA.393-201ENST00000383936 102 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 RNU6-1056P-201ENST00000383996 107 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 MIR518C-201ENST00000384822 101 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 MIR1185-2-201ENST00000408687 86 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 AL590139.1-201ENST00000416267 400 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 RPL23AP1-201ENST00000428990 471 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 TBCAP1-201ENST00000436520 327 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCN1P35523 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCN1P35523 AC022655.2-201ENST00000577280 318 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 AL138880.2-201ENST00000616214 239 ntBASIC4.72□□□□□ -1.65
CLCN1P35523 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN1P35523 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN1P35523 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CLCN1P35523 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN1P35523 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN1P35523 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
CLCN1P35523 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLCN1P35523 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CLCN1P35523 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN1P35523 RNA5SP505-201ENST00000364748 108 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 RNU6-588P-201ENST00000410281 105 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 SNORA36B-201ENST00000410438 131 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 YME1L1P1-201ENST00000429435 297 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 RNU7-115P-201ENST00000516433 55 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 RNU5F-4P-201ENST00000516581 114 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 AC079598.5-201ENST00000547460 117 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 AP001340.1-201ENST00000624405 217 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 AL773545.4-201ENST00000637262 310 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 AL513478.4-201ENST00000641636 310 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN1P35523 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLCN1P35523 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN1P35523 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLCN1P35523 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.71□□□□□ -1.66
CLCN1P35523 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN1P35523 AL391516.1-201ENST00000554380 2449 ntBASIC4.71□□□□□ -1.66
CLCN1P35523 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CLCN1P35523 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN1P35523 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCN1P35523 RNU1-32P-201ENST00000363937 159 ntBASIC4.7□□□□□ -1.66
CLCN1P35523 SNORA51.4-201ENST00000364993 124 ntBASIC4.7□□□□□ -1.66
CLCN1P35523 RNA5SP38-201ENST00000410750 119 ntBASIC4.7□□□□□ -1.66
CLCN1P35523 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCN1P35523 RNU6-659P-201ENST00000516454 104 ntBASIC4.7□□□□□ -1.66
CLCN1P35523 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCN1P35523 AL020997.2-201ENST00000602607 184 ntBASIC4.7□□□□□ -1.66
CLCN1P35523 AC079587.1-201ENST00000603846 277 ntBASIC4.7□□□□□ -1.66
CLCN1P35523 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCN1P35523 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCN1P35523 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCN1P35523 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCN1P35523 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLCN1P35523 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCN1P35523 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCN1P35523 AC006504.1-201ENST00000562493 3666 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 MIR873-201ENST00000401120 77 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 RPS16P5-201ENST00000406501 404 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 AC002075.2-201ENST00000425207 252 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCN1P35523 RPL23AP7-203ENST00000449021 469 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 CENPBD1P1-201ENST00000464061 469 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 HMGN2P9-201ENST00000476875 229 ntBASIC4.69□□□□□ -1.66
CLCN1P35523 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN1P35523 MIR3186-201ENST00000577404 85 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms