Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP001486.3-201ENST00000615334 372 ntBASIC2.55□□□□□ -2
HOXC13P31276 uc_338.11-201ENST00000619132 160 ntBASIC2.55□□□□□ -2
HOXC13P31276 SCARNA4-202ENST00000625402 129 ntBASIC2.55□□□□□ -2
HOXC13P31276 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.55□□□□□ -2
HOXC13P31276 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.55□□□□□ -2
HOXC13P31276 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC13P31276 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.54□□□□□ -2
HOXC13P31276 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXC13P31276 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.54□□□□□ -2
HOXC13P31276 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
HOXC13P31276 Y_RNA.149-201ENST00000363558 117 ntBASIC2.54□□□□□ -2
HOXC13P31276 RNU6-522P-201ENST00000364497 107 ntBASIC2.54□□□□□ -2
HOXC13P31276 RNU6-702P-201ENST00000364982 107 ntBASIC2.54□□□□□ -2
HOXC13P31276 SNORA63.7-201ENST00000365579 123 ntBASIC2.54□□□□□ -2
HOXC13P31276 Y_RNA.414-201ENST00000384011 101 ntBASIC2.54□□□□□ -2
HOXC13P31276 RNU6-1013P-201ENST00000384180 107 ntBASIC2.54□□□□□ -2
HOXC13P31276 Y_RNA.476-201ENST00000384347 108 ntBASIC2.54□□□□□ -2
HOXC13P31276 Y_RNA.527-201ENST00000384573 102 ntBASIC2.54□□□□□ -2
HOXC13P31276 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
HOXC13P31276 AL606923.1-201ENST00000406616 190 ntBASIC2.54□□□□□ -2
HOXC13P31276 RNU6-985P-201ENST00000410182 104 ntBASIC2.54□□□□□ -2
HOXC13P31276 Y_RNA.618-201ENST00000410949 107 ntBASIC2.54□□□□□ -2
HOXC13P31276 AC074085.1-201ENST00000413598 418 ntBASIC2.54□□□□□ -2
HOXC13P31276 AC138623.1-201ENST00000418060 216 ntBASIC2.54□□□□□ -2
HOXC13P31276 PGBD4P6-201ENST00000421501 610 ntBASIC2.54□□□□□ -2
HOXC13P31276 AL603825.1-201ENST00000438481 80 ntBASIC2.54□□□□□ -2
HOXC13P31276 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.54□□□□□ -2
HOXC13P31276 AC068781.1-201ENST00000488231 618 ntBASIC2.54□□□□□ -2
HOXC13P31276 RNA5SP503-201ENST00000517047 117 ntBASIC2.54□□□□□ -2
HOXC13P31276 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.54□□□□□ -2
HOXC13P31276 AL161670.1-201ENST00000554348 137 ntBASIC2.54□□□□□ -2
HOXC13P31276 AL118558.2-201ENST00000556294 238 ntBASIC2.54□□□□□ -2
HOXC13P31276 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.54□□□□□ -2
HOXC13P31276 MIR4529-201ENST00000578110 78 ntBASIC2.54□□□□□ -2
HOXC13P31276 MIR4648-201ENST00000580107 72 ntBASIC2.54□□□□□ -2
HOXC13P31276 AC007229.1-201ENST00000590455 412 ntBASIC2.54□□□□□ -2
HOXC13P31276 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.54□□□□□ -2
HOXC13P31276 AC083806.3-201ENST00000614016 455 ntBASIC2.54□□□□□ -2
HOXC13P31276 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.54□□□□□ -2
HOXC13P31276 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
HOXC13P31276 MTND5P6-201ENST00000422338 1798 ntBASIC2.54□□□□□ -2
HOXC13P31276 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HOXC13P31276 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HOXC13P31276 RNU6-942P-201ENST00000363002 107 ntBASIC2.53□□□□□ -2
HOXC13P31276 Y_RNA.112-201ENST00000363250 102 ntBASIC2.53□□□□□ -2
HOXC13P31276 RNU6-384P-201ENST00000364900 104 ntBASIC2.53□□□□□ -2
HOXC13P31276 RNU1-148P-201ENST00000384472 162 ntBASIC2.53□□□□□ -2
HOXC13P31276 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXC13P31276 RNU6-903P-201ENST00000391270 109 ntBASIC2.53□□□□□ -2
HOXC13P31276 AL079342.1-201ENST00000401460 267 ntBASIC2.53□□□□□ -2
HOXC13P31276 MIR1302-3-201ENST00000408128 138 ntBASIC2.53□□□□□ -2
HOXC13P31276 AIMP1P2-201ENST00000425294 312 ntBASIC2.53□□□□□ -2
HOXC13P31276 AL161788.1-201ENST00000441805 169 ntBASIC2.53□□□□□ -2
HOXC13P31276 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.53□□□□□ -2
HOXC13P31276 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.53□□□□□ -2
HOXC13P31276 Y_RNA.653-201ENST00000459091 95 ntBASIC2.53□□□□□ -2
HOXC13P31276 TRBVA-201ENST00000498804 316 ntBASIC2.53□□□□□ -2
HOXC13P31276 AC092436.1-201ENST00000506450 503 ntBASIC2.53□□□□□ -2
HOXC13P31276 MTCYBP40-201ENST00000509390 1135 ntBASIC2.53□□□□□ -2
HOXC13P31276 RPL39P5-202ENST00000512505 151 ntBASIC2.53□□□□□ -2
HOXC13P31276 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.53□□□□□ -2
HOXC13P31276 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.53□□□□□ -2
HOXC13P31276 RNU6-764P-201ENST00000516396 105 ntBASIC2.53□□□□□ -2
HOXC13P31276 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
HOXC13P31276 RN7SKP219-201ENST00000516825 296 ntBASIC2.53□□□□□ -2
HOXC13P31276 RNU6-1213P-201ENST00000517075 94 ntBASIC2.53□□□□□ -2
HOXC13P31276 AP000763.2-201ENST00000540641 163 ntBASIC2.53□□□□□ -2
HOXC13P31276 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.53□□□□□ -2
HOXC13P31276 MIR4790-201ENST00000577799 79 ntBASIC2.53□□□□□ -2
HOXC13P31276 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.53□□□□□ -2
HOXC13P31276 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.53□□□□□ -2
HOXC13P31276 AC060766.3-201ENST00000591442 263 ntBASIC2.53□□□□□ -2
HOXC13P31276 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
HOXC13P31276 AC022418.1-201ENST00000624118 445 ntBASIC2.53□□□□□ -2
HOXC13P31276 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.53□□□□□ -2
HOXC13P31276 MTND5P10-201ENST00000603719 1809 ntBASIC2.53□□□□□ -2
HOXC13P31276 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HOXC13P31276 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.53□□□□□ -2
HOXC13P31276 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC13P31276 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC13P31276 Y_RNA.5-201ENST00000362334 102 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU6-552P-201ENST00000362869 119 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU6-238P-201ENST00000363313 106 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 Y_RNA.158-201ENST00000363651 101 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU6-1188P-201ENST00000363795 107 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 Y_RNA.378-201ENST00000365652 113 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU6-843P-201ENST00000384454 104 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 Y_RNA.530-201ENST00000384587 101 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MIR561-201ENST00000385216 97 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MT-TG-201ENST00000387429 68 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 RNU6-550P-201ENST00000391057 101 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 MRPL42P3-201ENST00000401492 326 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 HMGB3P2-201ENST00000411913 584 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC13P31276 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 AL035666.1-201ENST00000446195 348 ntBASIC2.52□□□□□ -2.01
HOXC13P31276 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC13P31276 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms