Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.33□□□□□ -1.88
CNGA1P29973 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNGA1P29973 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNGA1P29973 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNGA1P29973 AC073325.2-201ENST00000339545 159 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 Y_RNA.496-201ENST00000384444 101 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 MIR29B2-201ENST00000385055 81 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 RNU6-1156P-201ENST00000410365 100 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AC007098.1-201ENST00000420122 367 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AC005534.2-201ENST00000431047 433 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.32□□□□□ -1.88
CNGA1P29973 AC145146.1-201ENST00000496370 254 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AC105758.1-201ENST00000506038 399 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.32□□□□□ -1.88
CNGA1P29973 MIR3117-201ENST00000584034 78 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.32□□□□□ -1.88
CNGA1P29973 AL670379.2-201ENST00000604983 252 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 AC069528.2-201ENST00000624849 1991 ntBASIC3.32□□□□□ -1.88
CNGA1P29973 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CNGA1P29973 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNGA1P29973 RNU6-874P-201ENST00000362390 105 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 Y_RNA.428-201ENST00000384078 102 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 MIR153-2-201ENST00000385225 87 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 AC092423.1-201ENST00000430165 186 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 AC092427.1-202ENST00000430569 476 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 AL035666.1-201ENST00000446195 348 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 SNORD109B-201ENST00000458961 67 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 SNORD109A-201ENST00000459128 67 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.31□□□□□ -1.88
CNGA1P29973 Y_RNA.706-201ENST00000516933 99 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 RNU6-56P-201ENST00000516986 93 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 AL355802.3-201ENST00000607571 545 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 PCGEM1.1-201ENST00000613431 131 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 AC007318.2-201ENST00000620999 243 ntBASIC3.31□□□□□ -1.88
CNGA1P29973 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.31□□□□□ -1.88
CNGA1P29973 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNGA1P29973 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
CNGA1P29973 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.3□□□□□ -1.88
CNGA1P29973 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.3□□□□□ -1.88
CNGA1P29973 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNGA1P29973 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNGA1P29973 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CNGA1P29973 RNU6-1159P-201ENST00000362933 107 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNGA1P29973 RNU6-378P-201ENST00000384324 107 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 SNORA46.1-201ENST00000391069 153 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 MIR190B-201ENST00000401119 79 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 MIR208B-201ENST00000401172 77 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 HMGB3P2-201ENST00000411913 584 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 PMCHL1-202ENST00000423102 261 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 AL445687.1-201ENST00000439946 251 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 UBBP3-201ENST00000445497 241 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.3□□□□□ -1.88
CNGA1P29973 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.3□□□□□ -1.88
CNGA1P29973 TOMM22P6-201ENST00000465035 409 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 AC090515.1-201ENST00000465295 476 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 SNORD116.3-201ENST00000517176 78 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
CNGA1P29973 AC091544.4-201ENST00000555268 342 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.3□□□□□ -1.88
CNGA1P29973 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.3□□□□□ -1.88
CNGA1P29973 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.3□□□□□ -1.88
CNGA1P29973 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.3□□□□□ -1.88
CNGA1P29973 AC078899.3-201ENST00000599065 212 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 MIR1244-1-201ENST00000612829 85 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 MIR1244-3-201ENST00000635744 85 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 MIR1244-2-201ENST00000636449 85 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 MIR1244-4-202ENST00000636813 85 ntBASIC3.3□□□□□ -1.88
CNGA1P29973 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNGA1P29973 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CNGA1P29973 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CNGA1P29973 Y_RNA.31-201ENST00000362574 102 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 SNORD115-8-201ENST00000363856 82 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 SNORD115-38-201ENST00000365037 82 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 XGY1-201ENST00000381172 446 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 RNU6-1032P-201ENST00000384100 107 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 MIR625-201ENST00000385047 85 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 FO393413.1-201ENST00000402892 195 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.29□□□□□ -1.88
CNGA1P29973 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.29□□□□□ -1.88
CNGA1P29973 RNU7-4P-201ENST00000516961 62 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 Y_RNA.711-201ENST00000516993 102 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 ELOCP31-201ENST00000540463 467 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.29□□□□□ -1.88
CNGA1P29973 MIR3171-201ENST00000584270 74 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.29□□□□□ -1.88
CNGA1P29973 AC090517.3-201ENST00000625170 141 ntBASIC3.29□□□□□ -1.88
CNGA1P29973 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CNGA1P29973 RNU6-1180P-201ENST00000364935 107 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 RNU1-115P-201ENST00000365329 160 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 SNORA9.2-201ENST00000365361 133 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 RNU6-1274P-201ENST00000384557 107 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 MIR487A-201ENST00000385009 80 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 MIR95-201ENST00000385072 81 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms