Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL353705.4-201ENST00000449661 238 ntBASIC4.21□□□□□ -1.74
RXRBP28702 AC084357.1-201ENST00000473404 255 ntBASIC4.21□□□□□ -1.74
RXRBP28702 MLLT10P2-201ENST00000506434 249 ntBASIC4.21□□□□□ -1.74
RXRBP28702 RNA5SP290-201ENST00000517133 127 ntBASIC4.21□□□□□ -1.74
RXRBP28702 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.21□□□□□ -1.74
RXRBP28702 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.21□□□□□ -1.74
RXRBP28702 MIR4644-201ENST00000579929 84 ntBASIC4.21□□□□□ -1.74
RXRBP28702 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.21□□□□□ -1.74
RXRBP28702 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RXRBP28702 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.21□□□□□ -1.74
RXRBP28702 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RXRBP28702 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RXRBP28702 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RXRBP28702 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RXRBP28702 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RXRBP28702 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RXRBP28702 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.2□□□□□ -1.74
RXRBP28702 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.2□□□□□ -1.74
RXRBP28702 RNA5SP42-201ENST00000364278 115 ntBASIC4.2□□□□□ -1.74
RXRBP28702 RNU6-1175P-201ENST00000365200 107 ntBASIC4.2□□□□□ -1.74
RXRBP28702 RNU6-514P-201ENST00000384208 107 ntBASIC4.2□□□□□ -1.74
RXRBP28702 U8.10-201ENST00000384260 133 ntBASIC4.2□□□□□ -1.74
RXRBP28702 MIR196B-201ENST00000384852 84 ntBASIC4.2□□□□□ -1.74
RXRBP28702 MIR329-1-201ENST00000385028 80 ntBASIC4.2□□□□□ -1.74
RXRBP28702 Y_RNA.586-201ENST00000391146 98 ntBASIC4.2□□□□□ -1.74
RXRBP28702 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RXRBP28702 RPL27AP8-201ENST00000424277 446 ntBASIC4.2□□□□□ -1.74
RXRBP28702 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RXRBP28702 Z82210.1-201ENST00000440037 231 ntBASIC4.2□□□□□ -1.74
RXRBP28702 AL513328.1-201ENST00000446460 224 ntBASIC4.2□□□□□ -1.74
RXRBP28702 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.2□□□□□ -1.74
RXRBP28702 AC117440.1-201ENST00000474107 571 ntBASIC4.2□□□□□ -1.74
RXRBP28702 RPS4XP13-201ENST00000483219 789 ntBASIC4.2□□□□□ -1.74
RXRBP28702 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.2□□□□□ -1.74
RXRBP28702 RNU6-966P-201ENST00000516479 104 ntBASIC4.2□□□□□ -1.74
RXRBP28702 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.2□□□□□ -1.74
RXRBP28702 DEFB122-202ENST00000569013 197 ntBASIC4.2□□□□□ -1.74
RXRBP28702 AC110741.2-201ENST00000605278 268 ntBASIC4.2□□□□□ -1.74
RXRBP28702 AC005828.6-201ENST00000606610 232 ntBASIC4.2□□□□□ -1.74
RXRBP28702 MTND1P7-201ENST00000632801 297 ntBASIC4.2□□□□□ -1.74
RXRBP28702 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.2□□□□□ -1.74
RXRBP28702 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
RXRBP28702 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RXRBP28702 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
RXRBP28702 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RXRBP28702 RNU6-818P-201ENST00000364837 108 ntBASIC4.19□□□□□ -1.74
RXRBP28702 RNU6-1145P-201ENST00000384246 107 ntBASIC4.19□□□□□ -1.74
RXRBP28702 MIR487A-201ENST00000385009 80 ntBASIC4.19□□□□□ -1.74
RXRBP28702 MIR153-2-201ENST00000385225 87 ntBASIC4.19□□□□□ -1.74
RXRBP28702 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RXRBP28702 SNORA46.1-201ENST00000391069 153 ntBASIC4.19□□□□□ -1.74
RXRBP28702 RNU6-1001P-201ENST00000411265 100 ntBASIC4.19□□□□□ -1.74
RXRBP28702 AC098614.2-201ENST00000426040 255 ntBASIC4.19□□□□□ -1.74
RXRBP28702 RPL31P13-201ENST00000484151 370 ntBASIC4.19□□□□□ -1.74
RXRBP28702 SNORA40.9-201ENST00000515895 93 ntBASIC4.19□□□□□ -1.74
RXRBP28702 RNU6-548P-201ENST00000517083 115 ntBASIC4.19□□□□□ -1.74
RXRBP28702 RNA5SP165-201ENST00000517142 115 ntBASIC4.19□□□□□ -1.74
RXRBP28702 AL391261.3-201ENST00000557194 520 ntBASIC4.19□□□□□ -1.74
RXRBP28702 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.19□□□□□ -1.74
RXRBP28702 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.19□□□□□ -1.74
RXRBP28702 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.19□□□□□ -1.74
RXRBP28702 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.19□□□□□ -1.74
RXRBP28702 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RXRBP28702 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
RXRBP28702 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RXRBP28702 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.18□□□□□ -1.74
RXRBP28702 RNU6-741P-201ENST00000383889 107 ntBASIC4.18□□□□□ -1.74
RXRBP28702 Y_RNA.400-201ENST00000383963 111 ntBASIC4.18□□□□□ -1.74
RXRBP28702 MIR184-201ENST00000384962 84 ntBASIC4.18□□□□□ -1.74
RXRBP28702 MIR186-201ENST00000384988 86 ntBASIC4.18□□□□□ -1.74
RXRBP28702 Y_RNA.597-201ENST00000410463 100 ntBASIC4.18□□□□□ -1.74
RXRBP28702 RNA5SP31-201ENST00000411144 127 ntBASIC4.18□□□□□ -1.74
RXRBP28702 AC243964.1-201ENST00000441814 261 ntBASIC4.18□□□□□ -1.74
RXRBP28702 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.18□□□□□ -1.74
RXRBP28702 UBL5P4-201ENST00000562584 236 ntBASIC4.18□□□□□ -1.74
RXRBP28702 ZNF192P1-203ENST00000565888 810 ntBASIC4.18□□□□□ -1.74
RXRBP28702 MIR5692C2-201ENST00000577959 77 ntBASIC4.18□□□□□ -1.74
RXRBP28702 SNORD53-201ENST00000579969 78 ntBASIC4.18□□□□□ -1.74
RXRBP28702 AC025754.2-201ENST00000606491 432 ntBASIC4.18□□□□□ -1.74
RXRBP28702 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.18□□□□□ -1.74
RXRBP28702 SNORA43.4-201ENST00000629559 138 ntBASIC4.18□□□□□ -1.74
RXRBP28702 AC244205.2-202ENST00000635781 342 ntBASIC4.18□□□□□ -1.74
RXRBP28702 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RXRBP28702 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RXRBP28702 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.18□□□□□ -1.74
RXRBP28702 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RXRBP28702 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RXRBP28702 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RXRBP28702 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
RXRBP28702 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RXRBP28702 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RXRBP28702 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RXRBP28702 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RXRBP28702 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RXRBP28702 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.17□□□□□ -1.74
RXRBP28702 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.17□□□□□ -1.74
RXRBP28702 RNU1-70P-201ENST00000362618 164 ntBASIC4.17□□□□□ -1.74
RXRBP28702 RNU5B-2P-201ENST00000363036 113 ntBASIC4.17□□□□□ -1.74
RXRBP28702 Y_RNA.230-201ENST00000364348 109 ntBASIC4.17□□□□□ -1.74
RXRBP28702 Y_RNA.262-201ENST00000364641 102 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms