Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC090517.1-201ENST00000569307 266 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 MIR548S-201ENST00000581352 82 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 AC011494.1-201ENST00000596454 237 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 AL031274.2-201ENST00000599419 203 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.4□□□□□ -2.03
ABCD3P28288 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.4□□□□□ -2.03
ABCD3P28288 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ABCD3P28288 MIR29C-201ENST00000385231 88 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AL356432.1-201ENST00000405809 419 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 MIR320B2-201ENST00000408479 138 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 RNU6-1050P-201ENST00000410388 107 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 RN7SKP284-201ENST00000411002 343 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AC243428.1-201ENST00000421099 264 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.39□□□□□ -2.03
ABCD3P28288 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 IFNA11P-201ENST00000446352 526 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AC011753.1-201ENST00000451001 220 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 RN7SKP210-201ENST00000459176 261 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 UBE2DNL-203ENST00000474922 222 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 FO393415.2-201ENST00000480085 343 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AC107032.1-201ENST00000485945 480 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.39□□□□□ -2.03
ABCD3P28288 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.39□□□□□ -2.03
ABCD3P28288 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.39□□□□□ -2.03
ABCD3P28288 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.39□□□□□ -2.03
ABCD3P28288 AC233702.2-202ENST00000562547 291 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.39□□□□□ -2.03
ABCD3P28288 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 RMST_6.1-201ENST00000611980 203 ntBASIC2.39□□□□□ -2.03
ABCD3P28288 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ABCD3P28288 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ABCD3P28288 RNU1-76P-201ENST00000362903 159 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 Y_RNA.99-201ENST00000363138 105 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU6-1059P-201ENST00000363752 98 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU6-842P-201ENST00000384269 107 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 Y_RNA.594-201ENST00000410373 140 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
ABCD3P28288 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
ABCD3P28288 AC007215.1-201ENST00000464893 276 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU5F-4P-201ENST00000516581 114 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU6-307P-201ENST00000516743 106 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU6-1198P-201ENST00000516904 67 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.38□□□□□ -2.03
ABCD3P28288 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.38□□□□□ -2.03
ABCD3P28288 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.38□□□□□ -2.03
ABCD3P28288 MIR4298-201ENST00000584380 73 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
ABCD3P28288 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.38□□□□□ -2.03
ABCD3P28288 AC006023.1-201ENST00000603944 259 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 AC025253.1-201ENST00000613623 543 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.38□□□□□ -2.03
ABCD3P28288 PISRT1.1-201ENST00000616930 107 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 AL359697.1-201ENST00000624879 587 ntBASIC2.38□□□□□ -2.03
ABCD3P28288 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
ABCD3P28288 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ABCD3P28288 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ABCD3P28288 Y_RNA.142-201ENST00000363491 102 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 SNORD14D-201ENST00000384390 87 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 Y_RNA.533-201ENST00000384596 114 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 MIR153-2-201ENST00000385225 87 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 RNA5SP210-201ENST00000391034 120 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 RNU2-41P-201ENST00000410991 178 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 snoU13.30-201ENST00000458951 104 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 AC093259.1-201ENST00000509755 300 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 MIR449C-201ENST00000516047 92 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 RNA5SP54-201ENST00000516951 92 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 RNA5SP490-201ENST00000517141 136 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 MIR3162-201ENST00000581818 82 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 AC005899.2-201ENST00000584353 90 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 AC005562.2-201ENST00000618264 111 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 MIR203B-201ENST00000636080 86 ntBASIC2.37□□□□□ -2.03
ABCD3P28288 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ABCD3P28288 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.37□□□□□ -2.03
ABCD3P28288 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
ABCD3P28288 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
ABCD3P28288 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ABCD3P28288 RNU6-137P-201ENST00000363680 108 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 SNORD115-8-201ENST00000363856 82 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 RNU6-595P-201ENST00000363944 107 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 Y_RNA.303-201ENST00000364998 94 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 SNORD115-38-201ENST00000365037 82 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.36□□□□□ -2.03
ABCD3P28288 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
ABCD3P28288 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.36□□□□□ -2.03
ABCD3P28288 AL035666.1-201ENST00000446195 348 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 SRIP1-201ENST00000489235 288 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 RPS23P5-201ENST00000495419 428 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.36□□□□□ -2.03
ABCD3P28288 RNU7-175P-201ENST00000515915 61 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.36□□□□□ -2.03
ABCD3P28288 AC105029.1-201ENST00000520250 669 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 AL590705.4-201ENST00000532209 134 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms