Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL049781.1-201ENST00000623195 3585 ntBASIC3.08□□□□□ -1.92
CD40P25942 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD40P25942 AC010329.5-201ENST00000623497 2174 ntBASIC3.08□□□□□ -1.92
CD40P25942 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.08□□□□□ -1.92
CD40P25942 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD40P25942 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CD40P25942 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 MIR208A-201ENST00000362287 71 ntBASIC3.07□□□□□ -1.92
CD40P25942 Y_RNA.60-201ENST00000362831 98 ntBASIC3.07□□□□□ -1.92
CD40P25942 SNORD32B-201ENST00000364460 84 ntBASIC3.07□□□□□ -1.92
CD40P25942 Y_RNA.286-201ENST00000364813 102 ntBASIC3.07□□□□□ -1.92
CD40P25942 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.07□□□□□ -1.92
CD40P25942 RNU6-1175P-201ENST00000365200 107 ntBASIC3.07□□□□□ -1.92
CD40P25942 SNORA70.4-201ENST00000365509 134 ntBASIC3.07□□□□□ -1.92
CD40P25942 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
CD40P25942 Y_RNA.562-201ENST00000384695 113 ntBASIC3.07□□□□□ -1.92
CD40P25942 Y_RNA.570-201ENST00000384750 101 ntBASIC3.07□□□□□ -1.92
CD40P25942 MIR1289-1-201ENST00000408836 144 ntBASIC3.07□□□□□ -1.92
CD40P25942 ELOCP21-201ENST00000412558 336 ntBASIC3.07□□□□□ -1.92
CD40P25942 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
CD40P25942 DBIP2-201ENST00000419076 262 ntBASIC3.07□□□□□ -1.92
CD40P25942 RAB28P5-201ENST00000427490 651 ntBASIC3.07□□□□□ -1.92
CD40P25942 AC009237.7-201ENST00000447357 229 ntBASIC3.07□□□□□ -1.92
CD40P25942 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.07□□□□□ -1.92
CD40P25942 RBMY2UP-201ENST00000453474 324 ntBASIC3.07□□□□□ -1.92
CD40P25942 MTND1P19-201ENST00000511780 315 ntBASIC3.07□□□□□ -1.92
CD40P25942 MIR2114-201ENST00000516645 80 ntBASIC3.07□□□□□ -1.92
CD40P25942 RNU6-388P-201ENST00000517012 105 ntBASIC3.07□□□□□ -1.92
CD40P25942 RNU6-389P-201ENST00000517048 105 ntBASIC3.07□□□□□ -1.92
CD40P25942 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.07□□□□□ -1.92
CD40P25942 AC010620.2-201ENST00000600135 313 ntBASIC3.07□□□□□ -1.92
CD40P25942 SNORD113-5-201ENST00000607261 78 ntBASIC3.07□□□□□ -1.92
CD40P25942 MIR7975-201ENST00000619350 68 ntBASIC3.07□□□□□ -1.92
CD40P25942 U4.6-201ENST00000621618 127 ntBASIC3.07□□□□□ -1.92
CD40P25942 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.07□□□□□ -1.92
CD40P25942 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD40P25942 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
CD40P25942 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CD40P25942 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CD40P25942 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CD40P25942 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CD40P25942 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
CD40P25942 RNU4-90P-201ENST00000362773 141 ntBASIC3.06□□□□□ -1.92
CD40P25942 RNU6-944P-201ENST00000364023 107 ntBASIC3.06□□□□□ -1.92
CD40P25942 Y_RNA.230-201ENST00000364348 109 ntBASIC3.06□□□□□ -1.92
CD40P25942 SNORD87-201ENST00000364849 89 ntBASIC3.06□□□□□ -1.92
CD40P25942 SNORA72.2-201ENST00000365028 127 ntBASIC3.06□□□□□ -1.92
CD40P25942 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.06□□□□□ -1.92
CD40P25942 HSPA8P1-201ENST00000425843 1833 ntBASIC3.06□□□□□ -1.92
CD40P25942 AC090515.1-201ENST00000465295 476 ntBASIC3.06□□□□□ -1.92
CD40P25942 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
CD40P25942 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.06□□□□□ -1.92
CD40P25942 SEPT14P8-201ENST00000508026 178 ntBASIC3.06□□□□□ -1.92
CD40P25942 MIR449C-201ENST00000516047 92 ntBASIC3.06□□□□□ -1.92
CD40P25942 RN7SKP83-201ENST00000516512 178 ntBASIC3.06□□□□□ -1.92
CD40P25942 RNU6-344P-201ENST00000516635 111 ntBASIC3.06□□□□□ -1.92
CD40P25942 RNU6-107P-201ENST00000516643 102 ntBASIC3.06□□□□□ -1.92
CD40P25942 SCARNA24.2-201ENST00000516968 130 ntBASIC3.06□□□□□ -1.92
CD40P25942 RNU6-586P-201ENST00000517265 104 ntBASIC3.06□□□□□ -1.92
CD40P25942 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.06□□□□□ -1.92
CD40P25942 AC055872.1-201ENST00000570978 278 ntBASIC3.06□□□□□ -1.92
CD40P25942 AC005357.1-201ENST00000588399 301 ntBASIC3.06□□□□□ -1.92
CD40P25942 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.06□□□□□ -1.92
CD40P25942 AC110774.1-201ENST00000623567 2018 ntBASIC3.06□□□□□ -1.92
CD40P25942 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.06□□□□□ -1.92
CD40P25942 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CD40P25942 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD40P25942 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
CD40P25942 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CD40P25942 RNU1-75P-201ENST00000347264 129 ntBASIC3.05□□□□□ -1.92
CD40P25942 RNU6-290P-201ENST00000365212 101 ntBASIC3.05□□□□□ -1.92
CD40P25942 MIR490-201ENST00000384865 128 ntBASIC3.05□□□□□ -1.92
CD40P25942 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CD40P25942 U6atac.2-201ENST00000408644 118 ntBASIC3.05□□□□□ -1.92
CD40P25942 MTND4LP30-201ENST00000454092 297 ntBASIC3.05□□□□□ -1.92
CD40P25942 AC025518.1-201ENST00000479856 347 ntBASIC3.05□□□□□ -1.92
CD40P25942 AC026784.1-201ENST00000507986 352 ntBASIC3.05□□□□□ -1.92
CD40P25942 Y_RNA.673-201ENST00000516306 88 ntBASIC3.05□□□□□ -1.92
CD40P25942 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.05□□□□□ -1.92
CD40P25942 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.05□□□□□ -1.92
CD40P25942 AC069294.1-201ENST00000608397 350 ntBASIC3.05□□□□□ -1.92
CD40P25942 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CD40P25942 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CD40P25942 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CD40P25942 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CD40P25942 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.04□□□□□ -1.92
CD40P25942 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CD40P25942 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD40P25942 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CD40P25942 MIR335-201ENST00000362173 94 ntBASIC3.04□□□□□ -1.92
CD40P25942 RNU4-35P-201ENST00000362588 141 ntBASIC3.04□□□□□ -1.92
CD40P25942 RNA5SP387-201ENST00000364226 106 ntBASIC3.04□□□□□ -1.92
CD40P25942 U3.39-201ENST00000408569 239 ntBASIC3.04□□□□□ -1.92
CD40P25942 AC126124.2-201ENST00000413542 321 ntBASIC3.04□□□□□ -1.92
CD40P25942 AL390729.2-201ENST00000416137 156 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms