Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC024581.2-201ENST00000619986 252 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 U2.22-201ENST00000636441 106 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
POLR2AP24928 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
POLR2AP24928 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR2AP24928 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
POLR2AP24928 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
POLR2AP24928 Y_RNA.54-201ENST00000362766 105 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 Y_RNA.123-201ENST00000363338 102 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 RNU6-72P-201ENST00000384285 79 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 RNU6-1140P-201ENST00000410517 106 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 EIF1P2-201ENST00000428233 350 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 WARS2P1-201ENST00000429678 537 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 RPS15AP7-201ENST00000439294 405 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 AC092798.1-201ENST00000458542 409 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 Y_RNA.644-201ENST00000459006 113 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 AC098869.1-201ENST00000481627 292 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 RNU6-991P-201ENST00000516168 107 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 Y_RNA.674-201ENST00000516362 113 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 RNU6-1212P-201ENST00000517023 104 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 RNU6-111P-201ENST00000517179 105 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 BX284668.6-201ENST00000606899 438 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.09□□□□□ -1.92
POLR2AP24928 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
POLR2AP24928 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
POLR2AP24928 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
POLR2AP24928 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR2AP24928 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
POLR2AP24928 AP001148.1-201ENST00000624124 2359 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
POLR2AP24928 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
POLR2AP24928 AL136964.1-201ENST00000622038 2990 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 Y_RNA.83-201ENST00000363005 113 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 Y_RNA.292-201ENST00000364904 97 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 RNU4-53P-201ENST00000410828 140 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 RPL23AP22-201ENST00000437556 453 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 AC146507.2-201ENST00000460608 476 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 RPL30P10-201ENST00000488148 337 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 AL137100.2-201ENST00000555786 315 ntBASIC3.08□□□□□ -1.92
POLR2AP24928 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR2AP24928 AC022336.2-201ENST00000568966 2538 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RNU1-75P-201ENST00000347264 129 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RNU6-746P-201ENST00000384112 109 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.555-201ENST00000384673 110 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AL603910.2-201ENST00000407268 136 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AL591806.2-201ENST00000433122 173 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR2AP24928 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
POLR2AP24928 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RPL23AP49-201ENST00000492925 468 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RNU6-1198P-201ENST00000516904 67 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AL161798.1-201ENST00000604630 131 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR2AP24928 AC005828.6-201ENST00000606610 232 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AC090132.2-201ENST00000615881 347 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR2AP24928 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR2AP24928 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR2AP24928 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
POLR2AP24928 UBE2WP1-201ENST00000362030 340 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 SNORA31-201ENST00000362607 130 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.82-201ENST00000363000 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.92-201ENST00000363043 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.150-201ENST00000363562 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RNU6-137P-201ENST00000363680 108 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.235-201ENST00000364412 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.297-201ENST00000364950 91 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.306-201ENST00000365015 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.308-201ENST00000365043 101 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.312-201ENST00000365089 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.322-201ENST00000365151 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 PCNPP3-201ENST00000393579 471 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AC007064.1-201ENST00000412238 351 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR2AP24928 HMGN2P30-201ENST00000423237 256 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Z82188.1-201ENST00000436709 154 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.650-201ENST00000459002 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 TOMM22P6-201ENST00000465035 409 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RPL23AP45-201ENST00000476406 468 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.777-201ENST00000516982 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 TRAV28-201ENST00000557548 323 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 UBL5P4-201ENST00000562584 236 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.771-201ENST00000598668 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 RMST_8.1-201ENST00000610287 165 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.789-201ENST00000622480 102 ntBASIC3.07□□□□□ -1.92
POLR2AP24928 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR2AP24928 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR2AP24928 Y_RNA.180-201ENST00000363867 113 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 RNU6-335P-201ENST00000364563 113 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 Y_RNA.270-201ENST00000364693 104 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 RNU6-245P-201ENST00000384020 107 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 Y_RNA.478-201ENST00000384358 107 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 AC092423.1-201ENST00000430165 186 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 AC098831.1-201ENST00000440661 216 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR2AP24928 RNU6-612P-201ENST00000516909 102 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 AC016256.1-201ENST00000547971 354 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms