Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.67□□□□□ -1.66
COL9A1P20849 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.67□□□□□ -1.66
COL9A1P20849 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.67□□□□□ -1.66
COL9A1P20849 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL9A1P20849 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL9A1P20849 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 USP8P1-201ENST00000494673 3183 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 RNU6-975P-201ENST00000384296 105 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 AL117342.1-201ENST00000404861 406 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 RNA5SP225-201ENST00000410874 135 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 GNG5P5-201ENST00000420444 220 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 AC008155.2-201ENST00000464337 397 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 RPS26P48-201ENST00000491713 339 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 AC026403.1-201ENST00000518938 295 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.66□□□□□ -1.66
COL9A1P20849 RN7SL600P-201ENST00000581811 299 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 AC016588.2-201ENST00000632484 3021 ntBASIC4.66□□□□□ -1.66
COL9A1P20849 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL9A1P20849 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.66□□□□□ -1.66
COL9A1P20849 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL9A1P20849 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL9A1P20849 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
COL9A1P20849 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
COL9A1P20849 SNORD24-201ENST00000383884 75 ntBASIC4.65□□□□□ -1.67
COL9A1P20849 RNA5SP129-201ENST00000410276 118 ntBASIC4.65□□□□□ -1.67
COL9A1P20849 AC023141.4-201ENST00000412031 328 ntBASIC4.65□□□□□ -1.67
COL9A1P20849 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.65□□□□□ -1.67
COL9A1P20849 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.65□□□□□ -1.67
COL9A1P20849 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL9A1P20849 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL9A1P20849 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.65□□□□□ -1.67
COL9A1P20849 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL9A1P20849 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL9A1P20849 AC000403.1-201ENST00000613696 3585 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
COL9A1P20849 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL9A1P20849 RNA5SP130-201ENST00000364431 114 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 RNVU1-14-201ENST00000384770 164 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 RPL35AP21-201ENST00000437667 333 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 RPS4XP11-201ENST00000446897 772 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.64□□□□□ -1.67
COL9A1P20849 MIR3609-201ENST00000582661 80 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL9A1P20849 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL9A1P20849 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.64□□□□□ -1.67
COL9A1P20849 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL9A1P20849 AC006504.1-201ENST00000562493 3666 ntBASIC4.64□□□□□ -1.67
COL9A1P20849 MAPK10-328ENST00000641553 4009 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COL9A1P20849 RNU6-888P-201ENST00000363010 101 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 Y_RNA.466-201ENST00000384294 113 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 MIR183-201ENST00000384958 110 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 SDHCP2-201ENST00000398565 501 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 Y_RNA.593-201ENST00000410292 98 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 RNU6-57P-201ENST00000411348 103 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 AC008134.1-201ENST00000420943 193 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 RNU6-893P-201ENST00000458841 100 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 SCARNA15-202ENST00000516881 127 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.63□□□□□ -1.67
COL9A1P20849 AC022655.2-201ENST00000577280 318 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 AC008739.2-201ENST00000597006 317 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 AL606490.9-201ENST00000603331 271 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL9A1P20849 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.63□□□□□ -1.67
COL9A1P20849 AL136164.3-201ENST00000624429 3978 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COL9A1P20849 AC010733.2-201ENST00000589496 5702 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.63□□□□□ -1.67
COL9A1P20849 AC010680.1-201ENST00000590024 3590 ntBASIC4.63□□□□□ -1.67
COL9A1P20849 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
COL9A1P20849 MUC2-202ENST00000613187 4845 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL9A1P20849 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
COL9A1P20849 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 SNORA63D-201ENST00000364359 132 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 Y_RNA.510-201ENST00000384511 114 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 RNU7-14P-201ENST00000459331 62 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 AC096725.1-201ENST00000514266 313 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 AC011604.1-201ENST00000545978 196 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 U6.73-201ENST00000619194 103 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 MIR3651-201ENST00000630427 90 ntBASIC4.62□□□□□ -1.67
COL9A1P20849 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.62□□□□□ -1.67
COL9A1P20849 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.62□□□□□ -1.67
COL9A1P20849 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
COL9A1P20849 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL9A1P20849 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms