Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RPL23AP67-201ENST00000465341 474 ntBASIC3.62□□□□□ -1.83
ITGA4P13612 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
ITGA4P13612 PHBP14-201ENST00000512887 367 ntBASIC3.62□□□□□ -1.83
ITGA4P13612 RNU2-31P-201ENST00000516954 155 ntBASIC3.62□□□□□ -1.83
ITGA4P13612 RRN3P3-201ENST00000549207 578 ntBASIC3.62□□□□□ -1.83
ITGA4P13612 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.62□□□□□ -1.83
ITGA4P13612 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.62□□□□□ -1.83
ITGA4P13612 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ITGA4P13612 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ITGA4P13612 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
ITGA4P13612 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ITGA4P13612 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ITGA4P13612 AC135776.4-201ENST00000624300 1904 ntBASIC3.62□□□□□ -1.83
ITGA4P13612 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ITGA4P13612 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
ITGA4P13612 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ITGA4P13612 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
ITGA4P13612 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ITGA4P13612 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
ITGA4P13612 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
ITGA4P13612 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ITGA4P13612 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ITGA4P13612 RNU1-75P-201ENST00000347264 129 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 Y_RNA.29-201ENST00000362570 113 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 RNU6-799P-201ENST00000363567 107 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 RNU4-56P-201ENST00000364700 142 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 Y_RNA.569-201ENST00000384749 103 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 AL357075.1-201ENST00000404107 726 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 MIR1298-201ENST00000408783 112 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 Z92545.1-201ENST00000411782 234 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.61□□□□□ -1.83
ITGA4P13612 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.61□□□□□ -1.83
ITGA4P13612 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
ITGA4P13612 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.61□□□□□ -1.83
ITGA4P13612 AL441985.1-201ENST00000457727 251 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 AC007215.1-201ENST00000464893 276 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 RN7SL504P-201ENST00000494496 287 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 Y_RNA.683-201ENST00000516508 93 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 MIR4644-201ENST00000579929 84 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 MZT1P2-201ENST00000604387 248 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 AC005000.2-201ENST00000605468 310 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 AC037487.3-201ENST00000606668 112 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 RNU6-91P-201ENST00000607774 107 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 AC006111.3-201ENST00000622137 383 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 IGHVIII-44-202ENST00000636235 289 ntBASIC3.61□□□□□ -1.83
ITGA4P13612 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.61□□□□□ -1.83
ITGA4P13612 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ITGA4P13612 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ITGA4P13612 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
ITGA4P13612 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ITGA4P13612 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
ITGA4P13612 RNU6-529P-201ENST00000363383 104 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 RNU5F-3P-201ENST00000363767 117 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 Y_RNA.230-201ENST00000364348 109 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 RNU6-750P-201ENST00000390946 107 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 U3.26-201ENST00000391236 204 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 AC126124.2-201ENST00000413542 321 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.6□□□□□ -1.83
ITGA4P13612 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.6□□□□□ -1.83
ITGA4P13612 RPL23AP3-201ENST00000453844 468 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.6□□□□□ -1.83
ITGA4P13612 AC005176.2-201ENST00000596933 147 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 AL034555.1-201ENST00000604816 211 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 MTND5P35-201ENST00000557537 1720 ntBASIC3.6□□□□□ -1.83
ITGA4P13612 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ITGA4P13612 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.6□□□□□ -1.83
ITGA4P13612 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ITGA4P13612 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ITGA4P13612 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ITGA4P13612 BX322639.1-202ENST00000423987 2213 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ITGA4P13612 Y_RNA.76-201ENST00000362931 109 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 Y_RNA.179-201ENST00000363844 90 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 SNORA48.2-201ENST00000390926 124 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AL390729.2-201ENST00000416137 156 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AC096649.2-201ENST00000416186 393 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.59□□□□□ -1.83
ITGA4P13612 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.59□□□□□ -1.83
ITGA4P13612 SETP5-201ENST00000437270 562 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 UQCRBP2-201ENST00000447827 297 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AC007395.1-201ENST00000451333 677 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.59□□□□□ -1.83
ITGA4P13612 CENPBD1P1-201ENST00000464061 469 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.59□□□□□ -1.83
ITGA4P13612 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.59□□□□□ -1.83
ITGA4P13612 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.59□□□□□ -1.83
ITGA4P13612 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.59□□□□□ -1.83
ITGA4P13612 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.59□□□□□ -1.83
ITGA4P13612 AC004792.1-201ENST00000614523 137 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 AC007496.3-201ENST00000624987 3443 ntBASIC3.59□□□□□ -1.83
ITGA4P13612 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
ITGA4P13612 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.84
ITGA4P13612 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ITGA4P13612 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ITGA4P13612 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
ITGA4P13612 AC017071.1-201ENST00000564407 2204 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms