Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CCDC34P1-201ENST00000507441 517 ntBASIC1.17□□□□□ -2.22
CD28P10747 AK3P2-201ENST00000507976 429 ntBASIC1.17□□□□□ -2.22
CD28P10747 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC096745.1-201ENST00000509945 370 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC091133.4-201ENST00000511142 308 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC091874.1-201ENST00000511402 339 ntBASIC1.17□□□□□ -2.22
CD28P10747 MIR449C-201ENST00000516047 92 ntBASIC1.17□□□□□ -2.22
CD28P10747 Y_RNA.673-201ENST00000516306 88 ntBASIC1.17□□□□□ -2.22
CD28P10747 Y_RNA.695-201ENST00000516715 107 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.17□□□□□ -2.22
CD28P10747 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.17□□□□□ -2.22
CD28P10747 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.17□□□□□ -2.22
CD28P10747 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.17□□□□□ -2.22
CD28P10747 Z98751.3-201ENST00000604447 521 ntBASIC1.17□□□□□ -2.22
CD28P10747 RPL17P51-201ENST00000605218 238 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC009994.1-201ENST00000606889 253 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC068944.2-201ENST00000610373 403 ntBASIC1.17□□□□□ -2.22
CD28P10747 U2.17-201ENST00000611454 95 ntBASIC1.17□□□□□ -2.22
CD28P10747 AP000770.2-201ENST00000623694 100 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CD28P10747 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.17□□□□□ -2.22
CD28P10747 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
CD28P10747 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CD28P10747 RNU1-76P-201ENST00000362903 159 ntBASIC1.16□□□□□ -2.22
CD28P10747 U3.9-201ENST00000363823 204 ntBASIC1.16□□□□□ -2.22
CD28P10747 RNU4-13P-201ENST00000364019 141 ntBASIC1.16□□□□□ -2.22
CD28P10747 RNU6-996P-201ENST00000365438 107 ntBASIC1.16□□□□□ -2.22
CD28P10747 RNU6-1158P-201ENST00000391167 107 ntBASIC1.16□□□□□ -2.22
CD28P10747 MIR1287-201ENST00000408492 90 ntBASIC1.16□□□□□ -2.22
CD28P10747 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.16□□□□□ -2.22
CD28P10747 AC002486.1-201ENST00000435098 391 ntBASIC1.16□□□□□ -2.22
CD28P10747 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.16□□□□□ -2.22
CD28P10747 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.16□□□□□ -2.22
CD28P10747 AL031274.1-201ENST00000450334 232 ntBASIC1.16□□□□□ -2.22
CD28P10747 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.16□□□□□ -2.22
CD28P10747 MTCO2P18-201ENST00000457151 658 ntBASIC1.16□□□□□ -2.22
CD28P10747 BET1P1-201ENST00000482276 359 ntBASIC1.16□□□□□ -2.22
CD28P10747 RNU6-567P-201ENST00000516746 107 ntBASIC1.16□□□□□ -2.22
CD28P10747 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.16□□□□□ -2.22
CD28P10747 AC007834.2-201ENST00000536310 343 ntBASIC1.16□□□□□ -2.22
CD28P10747 AC016256.1-201ENST00000547971 354 ntBASIC1.16□□□□□ -2.22
CD28P10747 EIF4A1P12-201ENST00000551910 141 ntBASIC1.16□□□□□ -2.22
CD28P10747 AC021231.3-201ENST00000558497 370 ntBASIC1.16□□□□□ -2.22
CD28P10747 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.16□□□□□ -2.22
CD28P10747 CYP4A27P-201ENST00000567218 190 ntBASIC1.16□□□□□ -2.22
CD28P10747 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.16□□□□□ -2.22
CD28P10747 AC008088.1-201ENST00000580993 280 ntBASIC1.16□□□□□ -2.22
CD28P10747 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.16□□□□□ -2.22
CD28P10747 HULC.1-201ENST00000612720 240 ntBASIC1.16□□□□□ -2.22
CD28P10747 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
CD28P10747 AC009509.4-201ENST00000619202 509 ntBASIC1.16□□□□□ -2.22
CD28P10747 AL136221.1-201ENST00000621449 509 ntBASIC1.16□□□□□ -2.22
CD28P10747 AC130454.1-201ENST00000622948 401 ntBASIC1.16□□□□□ -2.22
CD28P10747 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.16□□□□□ -2.22
CD28P10747 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.16□□□□□ -2.22
CD28P10747 MTND4P14-201ENST00000435799 1354 ntBASIC1.16□□□□□ -2.22
CD28P10747 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CD28P10747 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
CD28P10747 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CD28P10747 MIR126-201ENST00000362291 85 ntBASIC1.15□□□□□ -2.23
CD28P10747 RNU6-338P-201ENST00000383888 105 ntBASIC1.15□□□□□ -2.23
CD28P10747 POLHP1-201ENST00000411806 470 ntBASIC1.15□□□□□ -2.23
CD28P10747 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.15□□□□□ -2.23
CD28P10747 AL353193.1-201ENST00000421444 268 ntBASIC1.15□□□□□ -2.23
CD28P10747 MTCYBP8-201ENST00000422855 651 ntBASIC1.15□□□□□ -2.23
CD28P10747 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.15□□□□□ -2.23
CD28P10747 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.15□□□□□ -2.23
CD28P10747 AC016925.1-201ENST00000458303 298 ntBASIC1.15□□□□□ -2.23
CD28P10747 RNU7-63P-201ENST00000459054 62 ntBASIC1.15□□□□□ -2.23
CD28P10747 RNU7-138P-201ENST00000459479 64 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC130509.1-201ENST00000464158 433 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC023790.1-201ENST00000482174 347 ntBASIC1.15□□□□□ -2.23
CD28P10747 AL163973.1-201ENST00000484753 577 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC010409.1-201ENST00000487382 476 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC108078.1-201ENST00000508073 725 ntBASIC1.15□□□□□ -2.23
CD28P10747 SNORA44.1-201ENST00000517031 108 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.15□□□□□ -2.23
CD28P10747 OSBPL9P5-201ENST00000542581 171 ntBASIC1.15□□□□□ -2.23
CD28P10747 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.15□□□□□ -2.23
CD28P10747 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.15□□□□□ -2.23
CD28P10747 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.15□□□□□ -2.23
CD28P10747 MIR4421-201ENST00000578133 69 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC087683.1-201ENST00000591187 441 ntBASIC1.15□□□□□ -2.23
CD28P10747 AC008536.2-201ENST00000607284 349 ntBASIC1.15□□□□□ -2.23
CD28P10747 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
CD28P10747 uc_338.34-201ENST00000617467 174 ntBASIC1.15□□□□□ -2.23
CD28P10747 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.15□□□□□ -2.23
CD28P10747 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.15□□□□□ -2.23
CD28P10747 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CD28P10747 SNORD31B-201ENST00000364977 69 ntBASIC1.14□□□□□ -2.23
CD28P10747 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.14□□□□□ -2.23
CD28P10747 SNORA32.2-201ENST00000384049 122 ntBASIC1.14□□□□□ -2.23
CD28P10747 RNU6-378P-201ENST00000384324 107 ntBASIC1.14□□□□□ -2.23
CD28P10747 MIR30A-201ENST00000385092 71 ntBASIC1.14□□□□□ -2.23
CD28P10747 SNORA12.2-201ENST00000391040 156 ntBASIC1.14□□□□□ -2.23
CD28P10747 AC068050.1-201ENST00000394891 380 ntBASIC1.14□□□□□ -2.23
CD28P10747 RNU2-41P-201ENST00000410991 178 ntBASIC1.14□□□□□ -2.23
CD28P10747 AC073464.1-201ENST00000429823 534 ntBASIC1.14□□□□□ -2.23
CD28P10747 MTCO1P44-201ENST00000441935 243 ntBASIC1.14□□□□□ -2.23
CD28P10747 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms