Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.57□□□□□ -2.32
UBBP0CG47 AC011406.1-201ENST00000512440 370 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNA5SP384-201ENST00000516615 116 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RN7SKP49-201ENST00000516675 260 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.57□□□□□ -2.32
UBBP0CG47 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.57□□□□□ -2.32
UBBP0CG47 TPRKBP2-201ENST00000565969 475 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 MIR3923-201ENST00000579521 83 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AC107304.1-201ENST00000604229 296 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AL445984.1-201ENST00000637834 659 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 Y_RNA.367-201ENST00000365544 101 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL355143.1-201ENST00000407101 841 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 RNU6-1245P-201ENST00000411130 106 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC114482.1-201ENST00000418010 247 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.56□□□□□ -2.32
UBBP0CG47 ELOCP4-201ENST00000420090 333 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.56□□□□□ -2.32
UBBP0CG47 Z82205.1-201ENST00000428456 297 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.56□□□□□ -2.32
UBBP0CG47 AL133217.1-201ENST00000450980 425 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 C1DP4-201ENST00000455429 424 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.56□□□□□ -2.32
UBBP0CG47 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC116562.3-201ENST00000506136 177 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC104136.1-201ENST00000512969 394 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.56□□□□□ -2.32
UBBP0CG47 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.56□□□□□ -2.32
UBBP0CG47 RNU6-377P-201ENST00000515965 102 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC090572.1-201ENST00000519251 160 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC068587.5-201ENST00000528506 175 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.56□□□□□ -2.32
UBBP0CG47 HSPE1P4-201ENST00000550617 308 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 MTND4P33-201ENST00000556706 766 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.56□□□□□ -2.32
UBBP0CG47 MTCO2P2-201ENST00000591258 225 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL359999.1-201ENST00000604513 294 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL356157.2-201ENST00000605122 111 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL158050.2-201ENST00000605336 568 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 AL078595.3-201ENST00000623815 1166 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.56□□□□□ -2.32
UBBP0CG47 BX322639.1-202ENST00000423987 2213 ntBASIC0.56□□□□□ -2.32
UBBP0CG47 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.55□□□□□ -2.32
UBBP0CG47 RNU6-1123P-201ENST00000362347 106 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 RNU6-500P-201ENST00000362349 107 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 RNU6-552P-201ENST00000362869 119 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
UBBP0CG47 RAB28P5-201ENST00000427490 651 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.55□□□□□ -2.32
UBBP0CG47 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.55□□□□□ -2.32
UBBP0CG47 AC244505.5-201ENST00000443639 207 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 TAF9P1-201ENST00000445421 515 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 GAPDHP17-201ENST00000449858 1001 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 TAF9P2-201ENST00000454958 515 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 RPL39P38-201ENST00000467018 153 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AL163973.1-201ENST00000484753 577 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 RNU5F-4P-201ENST00000516581 114 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 SNORA25.17-201ENST00000517184 124 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AC109479.2-201ENST00000517842 174 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.55□□□□□ -2.32
UBBP0CG47 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.55□□□□□ -2.32
UBBP0CG47 AP001893.2-201ENST00000526949 202 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.55□□□□□ -2.32
UBBP0CG47 CYP4A27P-201ENST00000567218 190 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR4709-201ENST00000577272 72 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR4509-3-201ENST00000578671 94 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR5695-201ENST00000579717 85 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR4524B-201ENST00000581569 115 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR4509-2-201ENST00000583920 94 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AC016727.2-201ENST00000603988 621 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AL031281.1-201ENST00000604049 488 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 RPL17P51-201ENST00000605218 238 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AL359821.1-201ENST00000605519 182 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AC021506.2-201ENST00000612354 169 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR4509-1-201ENST00000618224 94 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 AC011155.2-201ENST00000623202 216 ntBASIC0.55□□□□□ -2.32
UBBP0CG47 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.55□□□□□ -2.32
UBBP0CG47 MTND5P17-201ENST00000418405 1603 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
UBBP0CG47 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
UBBP0CG47 RNU6-501P-201ENST00000364072 100 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 MIR608-201ENST00000384820 100 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 AC010099.3-201ENST00000423896 409 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 USP9YP28-201ENST00000435142 589 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 HMGN2P34-201ENST00000437647 269 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.54□□□□□ -2.32
UBBP0CG47 SNRPGP7-201ENST00000469016 106 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 UBE2V1P12-201ENST00000503954 474 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.54□□□□□ -2.32
UBBP0CG47 AC091435.1-201ENST00000505442 584 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 Y_RNA.672-201ENST00000516289 104 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 SNORD27.1-201ENST00000516319 72 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 RNU6-197P-201ENST00000516680 100 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms