Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 Y_RNA.498-201ENST00000384460 102 ntBASIC3.58□□□□□ -1.84
SYPP08247 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
SYPP08247 AL512633.1-201ENST00000399931 655 ntBASIC3.58□□□□□ -1.84
SYPP08247 AL591034.1-201ENST00000407447 340 ntBASIC3.58□□□□□ -1.84
SYPP08247 RNU6-1199P-201ENST00000411249 104 ntBASIC3.58□□□□□ -1.84
SYPP08247 AC023141.4-201ENST00000412031 328 ntBASIC3.58□□□□□ -1.84
SYPP08247 RPL23AP82-202ENST00000427528 469 ntBASIC3.58□□□□□ -1.84
SYPP08247 AC005326.1-201ENST00000429197 123 ntBASIC3.58□□□□□ -1.84
SYPP08247 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.58□□□□□ -1.84
SYPP08247 TMSB4XP3-201ENST00000445144 114 ntBASIC3.58□□□□□ -1.84
SYPP08247 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.58□□□□□ -1.84
SYPP08247 snoU13.28-201ENST00000459235 104 ntBASIC3.58□□□□□ -1.84
SYPP08247 AC091021.1-201ENST00000468051 388 ntBASIC3.58□□□□□ -1.84
SYPP08247 AIG1P1-201ENST00000503376 148 ntBASIC3.58□□□□□ -1.84
SYPP08247 MRPS18CP4-201ENST00000535821 231 ntBASIC3.58□□□□□ -1.84
SYPP08247 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.58□□□□□ -1.84
SYPP08247 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.58□□□□□ -1.84
SYPP08247 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
SYPP08247 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.58□□□□□ -1.84
SYPP08247 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.58□□□□□ -1.84
SYPP08247 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYPP08247 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SYPP08247 IPO8P1-201ENST00000455509 3109 ntBASIC3.57□□□□□ -1.84
SYPP08247 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.57□□□□□ -1.84
SYPP08247 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SYPP08247 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SYPP08247 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SYPP08247 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SYPP08247 MIR423-201ENST00000362201 94 ntBASIC3.57□□□□□ -1.84
SYPP08247 RNU4-80P-201ENST00000363200 141 ntBASIC3.57□□□□□ -1.84
SYPP08247 Y_RNA.308-201ENST00000365043 101 ntBASIC3.57□□□□□ -1.84
SYPP08247 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
SYPP08247 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
SYPP08247 RN7SKP53-201ENST00000411337 315 ntBASIC3.57□□□□□ -1.84
SYPP08247 AL121594.1-201ENST00000475906 575 ntBASIC3.57□□□□□ -1.84
SYPP08247 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.57□□□□□ -1.84
SYPP08247 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.57□□□□□ -1.84
SYPP08247 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.57□□□□□ -1.84
SYPP08247 RNU5F-2P-201ENST00000516066 82 ntBASIC3.57□□□□□ -1.84
SYPP08247 RNU7-200P-201ENST00000516105 62 ntBASIC3.57□□□□□ -1.84
SYPP08247 RNU6-191P-201ENST00000516295 94 ntBASIC3.57□□□□□ -1.84
SYPP08247 AP005660.1-201ENST00000522972 293 ntBASIC3.57□□□□□ -1.84
SYPP08247 MIR4298-201ENST00000584380 73 ntBASIC3.57□□□□□ -1.84
SYPP08247 AC091152.3-201ENST00000604227 325 ntBASIC3.57□□□□□ -1.84
SYPP08247 AC004467.1-201ENST00000615678 330 ntBASIC3.57□□□□□ -1.84
SYPP08247 AC091932.3-201ENST00000624223 323 ntBASIC3.57□□□□□ -1.84
SYPP08247 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SYPP08247 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SYPP08247 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.57□□□□□ -1.84
SYPP08247 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SYPP08247 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.57□□□□□ -1.84
SYPP08247 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SYPP08247 Y_RNA.304-201ENST00000365011 112 ntBASIC3.56□□□□□ -1.84
SYPP08247 MIR208B-201ENST00000401172 77 ntBASIC3.56□□□□□ -1.84
SYPP08247 RNU6-394P-201ENST00000410735 107 ntBASIC3.56□□□□□ -1.84
SYPP08247 OOSP1P1-201ENST00000423265 274 ntBASIC3.56□□□□□ -1.84
SYPP08247 AL606753.1-201ENST00000427435 87 ntBASIC3.56□□□□□ -1.84
SYPP08247 AL714022.1-201ENST00000439897 151 ntBASIC3.56□□□□□ -1.84
SYPP08247 IFNA11P-201ENST00000446352 526 ntBASIC3.56□□□□□ -1.84
SYPP08247 RPS29P26-201ENST00000477483 171 ntBASIC3.56□□□□□ -1.84
SYPP08247 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.56□□□□□ -1.84
SYPP08247 RNU6-1219P-201ENST00000516143 112 ntBASIC3.56□□□□□ -1.84
SYPP08247 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.56□□□□□ -1.84
SYPP08247 AP002001.1-203ENST00000534002 267 ntBASIC3.56□□□□□ -1.84
SYPP08247 MIR3145-201ENST00000580727 82 ntBASIC3.56□□□□□ -1.84
SYPP08247 AC012531.5-201ENST00000611375 151 ntBASIC3.56□□□□□ -1.84
SYPP08247 MIR6076-201ENST00000617521 113 ntBASIC3.56□□□□□ -1.84
SYPP08247 MIR8057-201ENST00000620957 69 ntBASIC3.56□□□□□ -1.84
SYPP08247 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
SYPP08247 AL133383.2-201ENST00000622958 2336 ntBASIC3.56□□□□□ -1.84
SYPP08247 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.56□□□□□ -1.84
SYPP08247 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
SYPP08247 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SYPP08247 AC092593.1-201ENST00000515413 1815 ntBASIC3.56□□□□□ -1.84
SYPP08247 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SYPP08247 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
SYPP08247 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYPP08247 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.55□□□□□ -1.84
SYPP08247 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYPP08247 RNU1-62P-201ENST00000362599 164 ntBASIC3.55□□□□□ -1.84
SYPP08247 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
SYPP08247 Y_RNA.262-201ENST00000364641 102 ntBASIC3.55□□□□□ -1.84
SYPP08247 RNA5SP240-201ENST00000365355 128 ntBASIC3.55□□□□□ -1.84
SYPP08247 RNU6-804P-201ENST00000384286 107 ntBASIC3.55□□□□□ -1.84
SYPP08247 MIR128-1-201ENST00000384921 82 ntBASIC3.55□□□□□ -1.84
SYPP08247 PTGES3P4-201ENST00000426243 356 ntBASIC3.55□□□□□ -1.84
SYPP08247 RPS15AP5-201ENST00000436276 388 ntBASIC3.55□□□□□ -1.84
SYPP08247 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.55□□□□□ -1.84
SYPP08247 HMGN2P7-201ENST00000456186 273 ntBASIC3.55□□□□□ -1.84
SYPP08247 AC008155.2-201ENST00000464337 397 ntBASIC3.55□□□□□ -1.84
SYPP08247 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.55□□□□□ -1.84
SYPP08247 SNORD19.2-201ENST00000516978 73 ntBASIC3.55□□□□□ -1.84
SYPP08247 MTND5P41-201ENST00000517498 206 ntBASIC3.55□□□□□ -1.84
SYPP08247 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.55□□□□□ -1.84
SYPP08247 MIR3144-201ENST00000579460 79 ntBASIC3.55□□□□□ -1.84
SYPP08247 AC068831.7-201ENST00000616954 363 ntBASIC3.55□□□□□ -1.84
SYPP08247 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.55□□□□□ -1.84
SYPP08247 snoU18.1-201ENST00000629629 71 ntBASIC3.55□□□□□ -1.84
SYPP08247 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYPP08247 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms