Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC092747.3-201ENST00000603769 301 ntBASIC1.31□□□□□ -2.2
CD74P04233 AP000654.2-201ENST00000605633 586 ntBASIC1.31□□□□□ -2.2
CD74P04233 AL022345.1-201ENST00000607292 135 ntBASIC1.31□□□□□ -2.2
CD74P04233 AC084768.2-201ENST00000622736 221 ntBASIC1.31□□□□□ -2.2
CD74P04233 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.31□□□□□ -2.2
CD74P04233 CBX3P1-201ENST00000325243 554 ntBASIC1.3□□□□□ -2.2
CD74P04233 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
CD74P04233 Y_RNA.378-201ENST00000365652 113 ntBASIC1.3□□□□□ -2.2
CD74P04233 SNORA69-201ENST00000383895 132 ntBASIC1.3□□□□□ -2.2
CD74P04233 RNU6-1106P-201ENST00000390845 107 ntBASIC1.3□□□□□ -2.2
CD74P04233 SNORA40.18-201ENST00000391200 128 ntBASIC1.3□□□□□ -2.2
CD74P04233 RNU2-66P-201ENST00000410650 161 ntBASIC1.3□□□□□ -2.2
CD74P04233 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CD74P04233 AC007098.1-201ENST00000420122 367 ntBASIC1.3□□□□□ -2.2
CD74P04233 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.3□□□□□ -2.2
CD74P04233 RNU7-138P-201ENST00000459479 64 ntBASIC1.3□□□□□ -2.2
CD74P04233 SRRM1P2-201ENST00000464531 1192 ntBASIC1.3□□□□□ -2.2
CD74P04233 RNU6-189P-201ENST00000516120 101 ntBASIC1.3□□□□□ -2.2
CD74P04233 RNA5SP490-201ENST00000517141 136 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.3□□□□□ -2.2
CD74P04233 RNU6-323P-201ENST00000521915 107 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC104576.1-201ENST00000524225 88 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC104383.1-201ENST00000530297 370 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC025423.5-201ENST00000550230 219 ntBASIC1.3□□□□□ -2.2
CD74P04233 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.3□□□□□ -2.2
CD74P04233 AL118558.2-201ENST00000556294 238 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.3□□□□□ -2.2
CD74P04233 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.3□□□□□ -2.2
CD74P04233 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.3□□□□□ -2.2
CD74P04233 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.3□□□□□ -2.2
CD74P04233 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.3□□□□□ -2.2
CD74P04233 MIR4422-201ENST00000581938 83 ntBASIC1.3□□□□□ -2.2
CD74P04233 MIR3136-201ENST00000583498 78 ntBASIC1.3□□□□□ -2.2
CD74P04233 MIR4424-201ENST00000585257 86 ntBASIC1.3□□□□□ -2.2
CD74P04233 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.3□□□□□ -2.2
CD74P04233 AP000942.3-201ENST00000603702 160 ntBASIC1.3□□□□□ -2.2
CD74P04233 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC017083.3-201ENST00000609955 700 ntBASIC1.3□□□□□ -2.2
CD74P04233 AL121757.2-201ENST00000611223 313 ntBASIC1.3□□□□□ -2.2
CD74P04233 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
CD74P04233 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
CD74P04233 AC068792.1-201ENST00000621354 417 ntBASIC1.3□□□□□ -2.2
CD74P04233 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CD74P04233 OR5AK4P-201ENST00000635912 903 ntBASIC1.3□□□□□ -2.2
CD74P04233 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.29□□□□□ -2.2
CD74P04233 AP000560.1-201ENST00000624150 1937 ntBASIC1.29□□□□□ -2.2
CD74P04233 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
CD74P04233 RNU6-661P-201ENST00000362409 107 ntBASIC1.29□□□□□ -2.2
CD74P04233 RNU1-17P-201ENST00000363022 152 ntBASIC1.29□□□□□ -2.2
CD74P04233 SNORD32B-201ENST00000364460 84 ntBASIC1.29□□□□□ -2.2
CD74P04233 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 RNU6-259P-201ENST00000383999 107 ntBASIC1.29□□□□□ -2.2
CD74P04233 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 AL358453.1-201ENST00000422522 250 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC078809.1-201ENST00000427601 140 ntBASIC1.29□□□□□ -2.2
CD74P04233 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.29□□□□□ -2.2
CD74P04233 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 HMGN2P18-201ENST00000450680 270 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC104564.1-201ENST00000493028 407 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC016632.1-201ENST00000503994 196 ntBASIC1.29□□□□□ -2.2
CD74P04233 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.29□□□□□ -2.2
CD74P04233 RNU6-250P-201ENST00000516958 103 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.29□□□□□ -2.2
CD74P04233 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.29□□□□□ -2.2
CD74P04233 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.29□□□□□ -2.2
CD74P04233 MIR3923-201ENST00000579521 83 ntBASIC1.29□□□□□ -2.2
CD74P04233 MIR3683-201ENST00000580847 82 ntBASIC1.29□□□□□ -2.2
CD74P04233 NBR2-204ENST00000587322 63 ntBASIC1.29□□□□□ -2.2
CD74P04233 VN1R107P-201ENST00000601784 209 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC010900.2-201ENST00000604508 210 ntBASIC1.29□□□□□ -2.2
CD74P04233 AP001330.5-201ENST00000607176 411 ntBASIC1.29□□□□□ -2.2
CD74P04233 AL357078.3-201ENST00000607528 618 ntBASIC1.29□□□□□ -2.2
CD74P04233 AC130454.1-201ENST00000622948 401 ntBASIC1.29□□□□□ -2.2
CD74P04233 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
CD74P04233 Y_RNA.99-201ENST00000363138 105 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6-23P-201ENST00000363283 107 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU4-20P-201ENST00000365601 151 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6-338P-201ENST00000383888 105 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6-26P-201ENST00000383985 107 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6-38P-201ENST00000384085 107 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6-378P-201ENST00000384324 107 ntBASIC1.28□□□□□ -2.2
CD74P04233 AL357139.1-201ENST00000407792 426 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.28□□□□□ -2.2
CD74P04233 RN7SKP61-201ENST00000410642 295 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNA5SP501-201ENST00000410990 112 ntBASIC1.28□□□□□ -2.2
CD74P04233 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.28□□□□□ -2.2
CD74P04233 AL133396.1-201ENST00000432048 687 ntBASIC1.28□□□□□ -2.2
CD74P04233 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.28□□□□□ -2.2
CD74P04233 AMD1P1-201ENST00000457220 922 ntBASIC1.28□□□□□ -2.2
CD74P04233 RNU6-333P-201ENST00000459117 107 ntBASIC1.28□□□□□ -2.2
CD74P04233 CENPUP1-201ENST00000526649 1202 ntBASIC1.28□□□□□ -2.2
CD74P04233 AP003034.1-201ENST00000534621 422 ntBASIC1.28□□□□□ -2.2
CD74P04233 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CD74P04233 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms