Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MTND4P5-201ENST00000435821 1374 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 SNORA8.3-201ENST00000384679 139 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.16□□□□□ -2.38
ABCA1O95477 RPS25P9-201ENST00000435591 252 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 SNRPGP12-201ENST00000449481 213 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.16□□□□□ -2.38
ABCA1O95477 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.16□□□□□ -2.38
ABCA1O95477 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.16□□□□□ -2.38
ABCA1O95477 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.16□□□□□ -2.38
ABCA1O95477 MTND5P42-201ENST00000637720 498 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
ABCA1O95477 RNU6-1123P-201ENST00000362347 106 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 RNU5E-6P-201ENST00000365574 115 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 RNU6-207P-201ENST00000384137 107 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 RNU6-950P-201ENST00000384651 107 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 RPS3AP36-201ENST00000398190 775 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 FCF1P10-201ENST00000407590 479 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 RNU2-3P-201ENST00000410144 191 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 Y_RNA.610-201ENST00000410681 103 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.16□□□□□ -2.38
ABCA1O95477 AC002486.1-201ENST00000435098 391 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 MTCO2P7-201ENST00000446518 666 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 AC022868.1-201ENST00000517767 391 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 BNIP3P6-201ENST00000549284 499 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.16□□□□□ -2.38
ABCA1O95477 AC021231.3-201ENST00000558497 370 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.16□□□□□ -2.38
ABCA1O95477 MIR3923-201ENST00000579521 83 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 MIR5190-201ENST00000581537 80 ntBASIC0.16□□□□□ -2.38
ABCA1O95477 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.16□□□□□ -2.38
ABCA1O95477 SNORD56.1-201ENST00000362913 68 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNY3P13-201ENST00000365542 102 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-43P-201ENST00000384302 107 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
ABCA1O95477 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.15□□□□□ -2.39
ABCA1O95477 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 snoU13.30-201ENST00000458951 104 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-953P-201ENST00000459154 107 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU7-34P-201ENST00000459394 64 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC007547.1-201ENST00000462177 490 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 SUMO2P5-201ENST00000506790 245 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC079395.1-201ENST00000510981 262 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 SNORA14.1-201ENST00000516113 141 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-1225P-201ENST00000516336 65 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC068587.4-201ENST00000533893 186 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AL132657.2-201ENST00000564417 358 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC092106.3-201ENST00000611308 722 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AL356094.1-201ENST00000624663 1212 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-743P-201ENST00000364151 106 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-354P-201ENST00000383862 107 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 Y_RNA.408-201ENST00000383987 102 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-610P-201ENST00000384264 107 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 UBE2V1P15-201ENST00000407776 448 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 BTF3L4P1-201ENST00000413813 468 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.15□□□□□ -2.39
ABCA1O95477 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.15□□□□□ -2.39
ABCA1O95477 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 RNU6-1146P-201ENST00000516282 102 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 Y_RNA.687-201ENST00000516558 91 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 MTND2P7-201ENST00000521337 640 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA1O95477 AC022893.3-201ENST00000607665 437 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC021506.2-201ENST00000612354 169 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 U6.42-201ENST00000618440 107 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 AC093875.1-201ENST00000623688 504 ntBASIC0.15□□□□□ -2.39
ABCA1O95477 snoZ40.1-201ENST00000364540 72 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 SNORA4.2-201ENST00000365313 147 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 RNU6-945P-201ENST00000383947 107 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 RNU6-293P-201ENST00000411259 106 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 AC244670.1-201ENST00000436879 112 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 AP000542.1-201ENST00000448473 371 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 NDUFB1P2-201ENST00000449477 176 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 SRRM1P2-201ENST00000464531 1192 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 AC112206.4-201ENST00000515142 405 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 AL359547.2-201ENST00000615810 418 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 AC006001.4-201ENST00000622243 395 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
ABCA1O95477 MTND5P33-201ENST00000571250 1450 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 MTND4P16-201ENST00000466108 1367 ntBASIC0.14□□□□□ -2.39
ABCA1O95477 MIR340-201ENST00000362125 95 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 RNU6-793P-201ENST00000384233 104 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 SNORA16.2-201ENST00000390991 127 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 RNU6-700P-201ENST00000391043 107 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 SNORA26.3-201ENST00000391119 136 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
ABCA1O95477 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.13□□□□□ -2.39
ABCA1O95477 AL354692.1-201ENST00000423044 315 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 RPL23AP95-201ENST00000426806 265 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 RPS23P5-201ENST00000495419 428 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.13□□□□□ -2.39
ABCA1O95477 RNU5F-4P-201ENST00000516581 114 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 RNU6-64P-201ENST00000517119 105 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AC016256.1-201ENST00000547971 354 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.13□□□□□ -2.39
ABCA1O95477 AC012507.3-201ENST00000603556 477 ntBASIC0.13□□□□□ -2.39
ABCA1O95477 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms