Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR3200-201ENST00000580767 85 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AC005000.2-201ENST00000605468 310 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AC005520.5-201ENST00000613926 164 ntBASIC2.06□□□□□ -2.08
SNX3O60493 MIR6128-201ENST00000615528 109 ntBASIC2.06□□□□□ -2.08
SNX3O60493 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SNX3O60493 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNX3O60493 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SNX3O60493 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNX3O60493 AC233981.2-201ENST00000611524 1614 ntBASIC2.06□□□□□ -2.08
SNX3O60493 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
SNX3O60493 RNU6-845P-201ENST00000362578 103 ntBASIC2.05□□□□□ -2.08
SNX3O60493 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SNX3O60493 MIR548F5-201ENST00000408421 86 ntBASIC2.05□□□□□ -2.08
SNX3O60493 RNA5SP494-201ENST00000410653 129 ntBASIC2.05□□□□□ -2.08
SNX3O60493 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AC096664.2-201ENST00000411843 406 ntBASIC2.05□□□□□ -2.08
SNX3O60493 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX3O60493 AC063976.3-201ENST00000426849 329 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX3O60493 AL513124.1-201ENST00000450410 614 ntBASIC2.05□□□□□ -2.08
SNX3O60493 PMCHL2-203ENST00000457791 237 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX3O60493 AF186996.7-201ENST00000492781 209 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX3O60493 ANXA2P1-201ENST00000505539 926 ntBASIC2.05□□□□□ -2.08
SNX3O60493 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.05□□□□□ -2.08
SNX3O60493 ACA59.1-201ENST00000515966 143 ntBASIC2.05□□□□□ -2.08
SNX3O60493 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
SNX3O60493 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.05□□□□□ -2.08
SNX3O60493 EIF4A1P12-201ENST00000551910 141 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX3O60493 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
SNX3O60493 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
SNX3O60493 AC099654.14-201ENST00000638599 341 ntBASIC2.05□□□□□ -2.08
SNX3O60493 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNX3O60493 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
SNX3O60493 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNX3O60493 RNU6-1059P-201ENST00000363752 98 ntBASIC2.04□□□□□ -2.08
SNX3O60493 Y_RNA.184-201ENST00000363884 108 ntBASIC2.04□□□□□ -2.08
SNX3O60493 RNU6-26P-201ENST00000383985 107 ntBASIC2.04□□□□□ -2.08
SNX3O60493 RNU6-1093P-201ENST00000391194 107 ntBASIC2.04□□□□□ -2.08
SNX3O60493 MIR548K-201ENST00000408406 116 ntBASIC2.04□□□□□ -2.08
SNX3O60493 RN7SKP32-201ENST00000410167 303 ntBASIC2.04□□□□□ -2.08
SNX3O60493 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
SNX3O60493 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
SNX3O60493 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX3O60493 PDCL2P1-201ENST00000419302 352 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX3O60493 USP9YP30-201ENST00000430729 455 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AL353705.4-201ENST00000449661 238 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.04□□□□□ -2.08
SNX3O60493 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX3O60493 PRELID3BP1-201ENST00000457142 540 ntBASIC2.04□□□□□ -2.08
SNX3O60493 FO393415.2-201ENST00000480085 343 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AC107032.1-201ENST00000485945 480 ntBASIC2.04□□□□□ -2.08
SNX3O60493 RPL23AP75-201ENST00000491601 451 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX3O60493 RNU1-54P-201ENST00000517181 120 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNX3O60493 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.04□□□□□ -2.08
SNX3O60493 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.04□□□□□ -2.08
SNX3O60493 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX3O60493 AL031274.2-201ENST00000599419 203 ntBASIC2.04□□□□□ -2.08
SNX3O60493 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.04□□□□□ -2.08
SNX3O60493 SNRPGP17-201ENST00000603780 214 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AC009994.1-201ENST00000606889 253 ntBASIC2.04□□□□□ -2.08
SNX3O60493 AC009318.2-201ENST00000610917 651 ntBASIC2.04□□□□□ -2.08
SNX3O60493 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SNX3O60493 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SNX3O60493 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNX3O60493 Y_RNA.339-201ENST00000365325 102 ntBASIC2.03□□□□□ -2.08
SNX3O60493 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
SNX3O60493 RNU2-41P-201ENST00000410991 178 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX3O60493 AC138393.2-201ENST00000414742 246 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX3O60493 AL137159.1-201ENST00000452808 512 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX3O60493 RN7SL636P-201ENST00000497504 294 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AC116353.2-201ENST00000505332 712 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AC116337.1-201ENST00000509680 687 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX3O60493 RNU6-991P-201ENST00000516168 107 ntBASIC2.03□□□□□ -2.08
SNX3O60493 RNA5SP137-201ENST00000516833 135 ntBASIC2.03□□□□□ -2.08
SNX3O60493 SNORA20.3-201ENST00000516880 132 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AC009127.3-201ENST00000570531 403 ntBASIC2.03□□□□□ -2.08
SNX3O60493 LARP7P3-201ENST00000579888 337 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AL033523.1-201ENST00000605153 153 ntBASIC2.03□□□□□ -2.08
SNX3O60493 MIR7106-201ENST00000612419 65 ntBASIC2.03□□□□□ -2.08
SNX3O60493 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.03□□□□□ -2.08
SNX3O60493 AC022306.2-201ENST00000617563 647 ntBASIC2.03□□□□□ -2.08
SNX3O60493 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX3O60493 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.03□□□□□ -2.08
SNX3O60493 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNX3O60493 AC062016.1-201ENST00000355719 319 ntBASIC2.02□□□□□ -2.09
SNX3O60493 SNORA80A-201ENST00000363922 136 ntBASIC2.02□□□□□ -2.09
SNX3O60493 RNU6-234P-201ENST00000365229 104 ntBASIC2.02□□□□□ -2.09
SNX3O60493 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AC074085.1-201ENST00000413598 418 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms