Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC098679.4-201ENST00000624241 654 ntBASIC1.68□□□□□ -2.14
RIPK2O43353 AC064859.1-201ENST00000624741 174 ntBASIC1.68□□□□□ -2.14
RIPK2O43353 FER-210ENST00000628534 558 ntTSL 5 BASIC1.68□□□□□ -2.14
RIPK2O43353 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RIPK2O43353 OR4G1P-203ENST00000641984 1631 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
RIPK2O43353 RNU6-428P-201ENST00000362942 107 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNY3P3-201ENST00000363816 102 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNU6-82P-201ENST00000363970 107 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 Y_RNA.231-201ENST00000364358 102 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 Y_RNA.450-201ENST00000384198 113 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AL117339.3-201ENST00000418733 162 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 MTCO1P20-201ENST00000425366 358 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 HMGB1P18-201ENST00000438801 619 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC013470.1-201ENST00000453438 462 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNU1-131P-201ENST00000458943 161 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNU6-1208P-201ENST00000459588 107 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 Y_RNA.654-201ENST00000497848 106 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 YWHAEP4-201ENST00000505390 198 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNA5SP182-201ENST00000516064 82 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 SNORA14.1-201ENST00000516113 141 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNU6-189P-201ENST00000516120 101 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 SNORD60.2-201ENST00000516883 86 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.67□□□□□ -2.14
RIPK2O43353 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.67□□□□□ -2.14
RIPK2O43353 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 MIR4298-201ENST00000584380 73 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC010525.2-201ENST00000590920 195 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC068790.6-201ENST00000602558 258 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC092747.3-201ENST00000603769 301 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 RNU6-89P-201ENST00000606519 100 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC092807.2-201ENST00000609367 243 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC090517.2-201ENST00000614966 680 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 U4.5-201ENST00000617137 123 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC103705.1-201ENST00000619013 241 ntBASIC1.67□□□□□ -2.14
RIPK2O43353 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.67□□□□□ -2.14
RIPK2O43353 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RIPK2O43353 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
RIPK2O43353 RNU6-1285P-201ENST00000363480 105 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 RNU6-105P-201ENST00000363909 104 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 RNU6-336P-201ENST00000364891 107 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 MTND1P34-201ENST00000438556 671 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.66□□□□□ -2.14
RIPK2O43353 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.66□□□□□ -2.14
RIPK2O43353 AC025465.3-201ENST00000510570 311 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.66□□□□□ -2.14
RIPK2O43353 AC109635.3-201ENST00000529536 185 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.66□□□□□ -2.14
RIPK2O43353 ZNF519P2-201ENST00000557032 169 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.66□□□□□ -2.14
RIPK2O43353 MIR3941-201ENST00000582572 103 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 AC004492.1-201ENST00000607036 742 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 RMST_3.1-201ENST00000611651 109 ntBASIC1.66□□□□□ -2.14
RIPK2O43353 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
RIPK2O43353 Y_RNA.9-201ENST00000362354 101 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RNY4P14-201ENST00000363656 96 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 SNORD32B-201ENST00000364460 84 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 Y_RNA.256-201ENST00000364594 104 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RNU4-12P-201ENST00000365233 139 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 Y_RNA.402-201ENST00000383972 102 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 SNORD73A-201ENST00000386062 65 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RIPK2O43353 HMGN2P26-201ENST00000463169 339 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RN7SL429P-201ENST00000479090 223 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RN7SL489P-201ENST00000486185 223 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RN7SL327P-201ENST00000488659 223 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 AC082651.2-201ENST00000496833 166 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 AC091885.1-201ENST00000506658 268 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 Y_RNA.665-201ENST00000516177 98 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RNU6-1069P-201ENST00000516612 133 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RNA5SP490-201ENST00000517141 136 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.65□□□□□ -2.15
RIPK2O43353 AC091544.4-201ENST00000555268 342 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 SUB1P4-201ENST00000566062 339 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 MIR4422-201ENST00000581938 83 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 MIR3136-201ENST00000583498 78 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RNU6-85P-201ENST00000605989 107 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RIPK2O43353 AL121757.2-201ENST00000611223 313 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 DISC2.1-201ENST00000612827 205 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 RN7SL853P-201ENST00000617250 223 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 AC073869.6-201ENST00000640656 341 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 LINC02555-201ENST00000563933 1951 ntBASIC1.65□□□□□ -2.15
RIPK2O43353 Y_RNA.6-201ENST00000362350 114 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 Y_RNA.332-201ENST00000365271 113 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 SNORA70B-201ENST00000384210 135 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 Y_RNA.505-201ENST00000384489 102 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 SNORD115-47-201ENST00000391226 86 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 RNU6-192P-201ENST00000391253 100 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 RN7SKP192-201ENST00000411291 327 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 RN7SKP101-201ENST00000411376 320 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 OOSP1P1-201ENST00000423265 274 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 MRPS10P2-201ENST00000431226 381 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 ERLEC1P1-201ENST00000433806 578 ntBASIC1.64□□□□□ -2.15
RIPK2O43353 MTND1P4-201ENST00000435196 415 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms