Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDH17O14917 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDH17O14917 AL353752.1-201ENST00000454946 260 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDH17O14917 AC145146.1-201ENST00000496370 254 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 MIR4719-201ENST00000585233 84 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 MAPK10-266ENST00000641066 6555 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PCDH17O14917 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
PCDH17O14917 AC009487.2-201ENST00000420969 6821 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH17O14917 RNU1-35P-201ENST00000362782 153 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 RNA5SP126-201ENST00000365092 109 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 Y_RNA.428-201ENST00000384078 102 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 MIR32-201ENST00000384965 70 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 MIR625-201ENST00000385047 85 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PCDH17O14917 SNORA46.1-201ENST00000391069 153 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 RNA5SP201-201ENST00000410316 124 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDH17O14917 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.72□□□□□ -1.97
PCDH17O14917 GSTA11P-201ENST00000452866 669 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 snoU13.6-201ENST00000458785 104 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDH17O14917 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 AC022140.2-201ENST00000623500 188 ntBASIC2.72□□□□□ -1.97
PCDH17O14917 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDH17O14917 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH17O14917 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PCDH17O14917 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH17O14917 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
PCDH17O14917 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.71□□□□□ -1.98
PCDH17O14917 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH17O14917 RNU4-15P-201ENST00000362613 141 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 RNU6-137P-201ENST00000363680 108 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 U3.9-201ENST00000363823 204 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 RNU6-99P-201ENST00000364721 107 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 SNORD42.2-201ENST00000365570 69 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 Y_RNA.405-201ENST00000383979 100 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 Y_RNA.451-201ENST00000384200 100 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 Y_RNA.524-201ENST00000384564 100 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 Y_RNA.561-201ENST00000384694 100 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 MIR181A2-201ENST00000384863 110 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 MIR1302-11-201ENST00000408051 138 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 MIR1302-9-201ENST00000408365 138 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 MIR1302-10-201ENST00000408734 138 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH17O14917 MTND1P14-201ENST00000427400 950 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AC092423.1-201ENST00000430165 186 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 MTCO3P29-201ENST00000432119 779 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AC105272.1-201ENST00000438604 198 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH17O14917 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH17O14917 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH17O14917 RPPH1-2P-201ENST00000516688 293 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AC091144.1-201ENST00000519573 138 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AC010928.2-201ENST00000588017 287 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PCDH17O14917 AC044792.1-201ENST00000593294 196 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AL356575.1-201ENST00000603008 283 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 AC116312.1-201ENST00000606841 314 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 MIR1302-2-201ENST00000607096 138 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH17O14917 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.71□□□□□ -1.98
PCDH17O14917 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH17O14917 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH17O14917 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
PCDH17O14917 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDH17O14917 RNU5F-3P-201ENST00000363767 117 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 RNU6-694P-201ENST00000364071 147 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 Y_RNA.395-201ENST00000383945 109 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 Y_RNA.445-201ENST00000384168 102 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 RNU6-17P-201ENST00000384245 107 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 Y_RNA.463-201ENST00000384271 102 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 RNU6-18P-201ENST00000384527 107 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 MIR9-1-201ENST00000385198 89 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 MIR320B2-201ENST00000408479 138 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDH17O14917 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDH17O14917 Z82188.1-201ENST00000436709 154 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDH17O14917 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDH17O14917 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDH17O14917 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 Y_RNA.701-201ENST00000516812 110 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 RNA5SP54-201ENST00000516951 92 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 SNORA48.11-201ENST00000517015 89 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 SNORD116.3-201ENST00000517176 78 ntBASIC2.7□□□□□ -1.98
PCDH17O14917 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDH17O14917 EIF4A1P12-201ENST00000551910 141 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms