Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU2-41P-201ENST00000410991 178 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 RN7SKP192-201ENST00000411291 327 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.82□□□□□ -2.12
SLC28A1O00337 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
SLC28A1O00337 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.82□□□□□ -2.12
SLC28A1O00337 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 RNU5F-4P-201ENST00000516581 114 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
SLC28A1O00337 AC090517.1-201ENST00000569307 266 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 AC100830.2-201ENST00000581636 240 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC28A1O00337 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 AC009994.1-201ENST00000606889 253 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SLC28A1O00337 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.81□□□□□ -2.12
SLC28A1O00337 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SLC28A1O00337 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SLC28A1O00337 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 RNU6-933P-201ENST00000384424 107 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SLC28A1O00337 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SLC28A1O00337 MIR450B-201ENST00000401182 78 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 RNU6-325P-201ENST00000411132 105 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AC123900.1-201ENST00000420390 96 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AL139415.2-201ENST00000431968 163 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SLC28A1O00337 AL035666.1-201ENST00000446195 348 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AC007547.1-201ENST00000462177 490 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 MTCO1P29-201ENST00000496868 288 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 ATP5EP1-201ENST00000510257 156 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 Y_RNA.665-201ENST00000516177 98 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 RNU2-44P-201ENST00000516795 194 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC28A1O00337 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC28A1O00337 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC28A1O00337 RPL17P51-201ENST00000605218 238 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 FAM157A-202ENST00000615155 405 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AC005296.1-201ENST00000616145 209 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AL590240.4-201ENST00000616908 390 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AC091932.3-201ENST00000624223 323 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.81□□□□□ -2.12
SLC28A1O00337 MIR1321-201ENST00000637766 79 ntBASIC1.81□□□□□ -2.12
SLC28A1O00337 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.8□□□□□ -2.12
SLC28A1O00337 LINC02555-201ENST00000563933 1951 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 Y_RNA.123-201ENST00000363338 102 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNY3P3-201ENST00000363816 102 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNA5SP493-201ENST00000364115 91 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 Y_RNA.373-201ENST00000365600 103 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 SNORA32.2-201ENST00000384049 122 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNU6-1093P-201ENST00000391194 107 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 SNORA3.2-201ENST00000408221 125 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 EIF4EP2-201ENST00000422816 654 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 NDUFA5P4-201ENST00000436704 385 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.8□□□□□ -2.12
SLC28A1O00337 snoU13.6-201ENST00000458785 104 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNU6-1098P-201ENST00000516772 96 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 AP005639.2-201ENST00000527592 928 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 AC026371.1-201ENST00000551867 419 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.8□□□□□ -2.12
SLC28A1O00337 AC012557.2-201ENST00000605919 418 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 AF250324.2-201ENST00000608299 610 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.8□□□□□ -2.12
SLC28A1O00337 RNU6-451P-201ENST00000362921 107 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 RNU6-128P-201ENST00000383976 107 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 RNU6-1026P-201ENST00000384465 108 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 MIR181A1-201ENST00000385026 110 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 MIR23A-201ENST00000385245 73 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SLC28A1O00337 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC28A1O00337 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 MTCO1P20-201ENST00000425366 358 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC28A1O00337 SNRPEP8-201ENST00000442866 260 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
SLC28A1O00337 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.79□□□□□ -2.12
SLC28A1O00337 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SLC28A1O00337 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 AC107393.1-201ENST00000512403 346 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 AC008549.1-201ENST00000512900 643 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 AC087441.2-201ENST00000529141 262 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC28A1O00337 MIR3169-201ENST00000578032 83 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC28A1O00337 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.79□□□□□ -2.12
SLC28A1O00337 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.79□□□□□ -2.12
SLC28A1O00337 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.79□□□□□ -2.12
SLC28A1O00337 CBX3P1-201ENST00000325243 554 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 Y_RNA.38-201ENST00000362617 102 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 RNU1-76P-201ENST00000362903 159 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 RNU6-254P-201ENST00000363377 107 ntBASIC1.78□□□□□ -2.12
SLC28A1O00337 SNORD113-7-201ENST00000363762 77 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms