Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 RNU6-529P-201ENST00000363383 104 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 RNU6-1210P-201ENST00000363775 107 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 RNU6-82P-201ENST00000363970 107 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 RNU6-1187P-201ENST00000364771 110 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 RNA5SP219-201ENST00000390940 113 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 RNU6-648P-201ENST00000410190 107 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL117339.3-201ENST00000418733 162 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 TOMM22P2-201ENST00000430735 237 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL161788.1-201ENST00000441805 169 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC013470.1-201ENST00000453438 462 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 MTCO3P38-201ENST00000468910 766 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 RPL30P12-201ENST00000474666 353 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL121594.1-201ENST00000475906 575 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.3□□□□□ -2.2
VGLL3A8MV65 CYCSP27-201ENST00000527643 293 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL512360.1-201ENST00000555346 234 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC093249.1-201ENST00000567049 203 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC064807.4-201ENST00000607201 407 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC008121.3-201ENST00000618726 433 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AL159153.1-201ENST00000619688 317 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC097372.5-201ENST00000623665 376 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VGLL3A8MV65 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.3□□□□□ -2.2
VGLL3A8MV65 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.3□□□□□ -2.2
VGLL3A8MV65 AC006026.1-201ENST00000444025 1803 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-428P-201ENST00000362942 107 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-336P-201ENST00000364891 107 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU4-66P-201ENST00000365199 138 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-38P-201ENST00000384085 107 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 SNORD116-4-201ENST00000384733 96 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNA5SP213-201ENST00000391031 106 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 CBX3P9-201ENST00000402326 552 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-1245P-201ENST00000411130 106 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 MTND3P21-201ENST00000433774 331 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RPL39P29-201ENST00000447779 157 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 AL031274.1-201ENST00000450334 232 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 AL137159.1-201ENST00000452808 512 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 TPTE2P5-203ENST00000458118 728 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-333P-201ENST00000459117 107 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 AC091885.1-201ENST00000506658 268 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-189P-201ENST00000516120 101 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 RNU6-506P-201ENST00000516553 94 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 SNORA48.11-201ENST00000517015 89 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 CENPUP1-201ENST00000526649 1202 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 AC091135.1-201ENST00000585943 307 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 BNIP3P16-201ENST00000589779 534 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 VN1R80P-201ENST00000597126 338 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 VN1R107P-201ENST00000601784 209 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 AC092954.2-201ENST00000609103 430 ntBASIC1.29□□□□□ -2.2
VGLL3A8MV65 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.29□□□□□ -2.2
VGLL3A8MV65 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
VGLL3A8MV65 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VGLL3A8MV65 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VGLL3A8MV65 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
VGLL3A8MV65 RNU4-20P-201ENST00000365601 151 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SNORA22-201ENST00000383907 134 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SNORA22C-201ENST00000384614 134 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 MIR544A-201ENST00000384855 91 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 MIR517C-201ENST00000385103 95 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 MIR514A2-201ENST00000385131 88 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 MIR514A3-201ENST00000385132 88 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 MIR561-201ENST00000385216 97 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 RNU6-780P-201ENST00000391030 104 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 RPS29P13-201ENST00000402041 169 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 RNU6-293P-201ENST00000411259 106 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.28□□□□□ -2.2
VGLL3A8MV65 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.28□□□□□ -2.2
VGLL3A8MV65 ARL5AP1-201ENST00000418991 388 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 AL589823.1-201ENST00000429577 183 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SEPT14P3-201ENST00000439401 183 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 AL732372.2-207ENST00000445840 183 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SEPT14P2-201ENST00000453405 183 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 RNU7-138P-201ENST00000459479 64 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 Y_RNA.654-201ENST00000497848 106 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SEPT14P4-201ENST00000513445 186 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SNORA14.1-201ENST00000516113 141 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 RNU6-586P-201ENST00000517265 104 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.28□□□□□ -2.2
VGLL3A8MV65 FO082796.1-201ENST00000523795 183 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 AL118558.2-201ENST00000556294 238 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.28□□□□□ -2.2
VGLL3A8MV65 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.28□□□□□ -2.2
VGLL3A8MV65 EIF1P4-201ENST00000572664 335 ntBASIC1.28□□□□□ -2.2
VGLL3A8MV65 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms