Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AC018692.3-201ENST00000623929 123 ntBASIC4.4□□□□□ -1.71
USP17L4A6NCW7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.4□□□□□ -1.71
USP17L4A6NCW7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP17L4A6NCW7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
USP17L4A6NCW7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 RNU6-655P-201ENST00000362858 107 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.329-201ENST00000365209 107 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 SNORD50.2-201ENST00000365465 70 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 MIR186-201ENST00000384988 86 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 AC027124.2-201ENST00000428249 105 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 AC005326.1-201ENST00000429197 123 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 RPL23AP70-201ENST00000483361 460 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 TRBV12-2-201ENST00000489763 344 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 HMGB3P3-201ENST00000510526 400 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 MTND5P41-201ENST00000517498 206 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 AC006111.3-201ENST00000622137 383 ntBASIC4.39□□□□□ -1.71
USP17L4A6NCW7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP17L4A6NCW7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 RNU4-15P-201ENST00000362613 141 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 RNU6-704P-201ENST00000364162 103 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.441-201ENST00000384123 112 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.571-201ENST00000384753 98 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 MIR634-201ENST00000385208 97 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 SNORA11.2-201ENST00000408318 127 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC004386.2-201ENST00000441858 148 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC115115.1-201ENST00000449927 248 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 RPS3P1-201ENST00000456781 192 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 RPL31P41-201ENST00000477967 372 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC145146.1-201ENST00000496370 254 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC025281.1-201ENST00000567026 265 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 MIR5006-201ENST00000583027 110 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AL133393.1-201ENST00000603277 287 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC068205.3-201ENST00000636385 468 ntBASIC4.38□□□□□ -1.71
USP17L4A6NCW7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.38□□□□□ -1.71
USP17L4A6NCW7 AC026241.1-201ENST00000517873 2142 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
USP17L4A6NCW7 RNU4-17P-201ENST00000365598 141 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.398-201ENST00000383952 99 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 U3.40-201ENST00000408706 208 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 RNU6-1135P-201ENST00000411083 103 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 DBIP2-201ENST00000419076 262 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.37□□□□□ -1.71
USP17L4A6NCW7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.37□□□□□ -1.71
USP17L4A6NCW7 AC091179.1-201ENST00000461606 579 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 AC025518.1-201ENST00000479856 347 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 RNU2-27P-201ENST00000516185 142 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 RNU6-346P-201ENST00000516288 111 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.37□□□□□ -1.71
USP17L4A6NCW7 AP001485.1-201ENST00000604799 199 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 MTND1P7-201ENST00000632801 297 ntBASIC4.37□□□□□ -1.71
USP17L4A6NCW7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.37□□□□□ -1.71
USP17L4A6NCW7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP17L4A6NCW7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
USP17L4A6NCW7 AL359854.1-201ENST00000614203 1594 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP17L4A6NCW7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.7-201ENST00000362352 102 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 RNU4-35P-201ENST00000362588 141 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 RNU1-57P-201ENST00000384491 166 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 SNORA48.2-201ENST00000390926 124 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.36□□□□□ -1.71
USP17L4A6NCW7 TOMM22P2-201ENST00000430735 237 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 RNU6-436P-201ENST00000516171 114 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 SNORA31.21-201ENST00000517180 77 ntBASIC4.36□□□□□ -1.71
USP17L4A6NCW7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 Y_RNA.291-201ENST00000364886 113 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 SNORA18.2-201ENST00000383865 132 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 AC004866.1-201ENST00000411748 78 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 RNU1-117P-201ENST00000517041 158 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 YPEL5P2-201ENST00000605553 359 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 AC015813.4-201ENST00000610469 179 ntBASIC4.35□□□□□ -1.71
USP17L4A6NCW7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
USP17L4A6NCW7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms