Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RPS26P42-201ENST00000413485 326 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AC096920.1-201ENST00000423991 241 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 LINC01399-202ENST00000458450 244 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU7-87P-201ENST00000459343 62 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AC087477.1-201ENST00000465747 340 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AL049873.1-201ENST00000480540 376 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU6-1114P-201ENST00000516022 107 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU5B-3P-201ENST00000516601 115 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU6-1012P-201ENST00000516606 109 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU6-567P-201ENST00000516746 107 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 ACA59.2-201ENST00000517061 156 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AC090897.2-201ENST00000581715 130 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 U6.92-201ENST00000636464 89 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 LINC02555-201ENST00000563933 1951 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 MIR335-201ENST00000362173 94 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RNU6-622P-201ENST00000384272 103 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 MIR544A-201ENST00000384855 91 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RNU6-750P-201ENST00000390946 107 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AC096649.2-201ENST00000416186 393 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 CYCSP48-201ENST00000417124 323 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AL358075.3-201ENST00000426289 226 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 Z82188.1-201ENST00000436709 154 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AL161651.1-201ENST00000440882 223 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AL441985.1-201ENST00000457727 251 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AP001025.1-201ENST00000486139 332 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 RNU6-1023P-201ENST00000516137 106 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AC093023.1-201ENST00000547375 507 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 HSPE1P4-201ENST00000550617 308 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AC007375.1-201ENST00000554513 578 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 SNORA43.4-201ENST00000629559 138 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 AC002543.1-201ENST00000299783 1954 ntBASIC3.1□□□□□ -1.91
CCDC78A2IDD5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.14-201ENST00000362415 103 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNU6-212P-201ENST00000362642 104 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNU6-1301P-201ENST00000362724 104 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.64-201ENST00000362845 102 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 SNORD81.1-201ENST00000363064 77 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 MIR32-201ENST00000384965 70 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 MT-TW-201ENST00000387382 68 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 SNORD115-46-201ENST00000390982 71 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNU6-130P-201ENST00000411112 103 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 EIF1P2-201ENST00000428233 350 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AC016700.2-201ENST00000446011 156 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 TOMM22P6-201ENST00000465035 409 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RPL39P38-201ENST00000467018 153 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 TRBVB-201ENST00000477100 408 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AF186996.7-201ENST00000492781 209 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNU6-581P-201ENST00000516214 105 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNU6-397P-201ENST00000516226 104 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 RNA5SP54-201ENST00000516951 92 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC78A2IDD5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AC005357.1-201ENST00000588399 301 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AC141273.2-201ENST00000618989 130 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AC010889.1-201ENST00000566193 2666 ntBASIC3.09□□□□□ -1.91
CCDC78A2IDD5 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.92
CCDC78A2IDD5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC78A2IDD5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 RNU6-708P-201ENST00000384217 107 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 RNA5SP213-201ENST00000391031 106 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 SNORA11.2-201ENST00000408318 127 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 AC009310.1-201ENST00000414414 451 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC78A2IDD5 PTGES3P4-201ENST00000426243 356 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 AC244670.1-201ENST00000436879 112 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC78A2IDD5 GPM6BP3-201ENST00000442797 145 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
CCDC78A2IDD5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC78A2IDD5 AC010469.2-201ENST00000496412 480 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms