Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 SNORA60-201ENST00000362396 134 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 SNORA70.2-201ENST00000364506 135 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 MIR626-201ENST00000385032 94 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AL139281.1-201ENST00000422120 335 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 TBCAP1-201ENST00000436520 327 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 PPIAP15-201ENST00000479662 484 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 RPL36AP48-201ENST00000485521 314 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 RNU7-121P-201ENST00000516604 62 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AC021269.2-201ENST00000532318 330 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 YPEL5P3-201ENST00000547227 352 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AL391261.4-201ENST00000616012 481 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 MIR6758-201ENST00000620653 63 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 AC134026.1-201ENST00000623249 2239 ntBASIC3.38□□□□□ -1.87
SHISA3A0PJX4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 RNA5SP509-201ENST00000364577 119 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 RNU6-417P-201ENST00000384712 107 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 MIR586-201ENST00000385035 97 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 RNU6-578P-201ENST00000390980 103 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 AC091390.1-201ENST00000433904 331 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 RN7SL604P-201ENST00000492589 296 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 SNORD116-25-201ENST00000516517 92 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 CYCSP29-201ENST00000533731 318 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 TOMM20P2-201ENST00000540082 421 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 AC110741.2-201ENST00000605278 268 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 AC069294.1-201ENST00000608397 350 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 U6.115-201ENST00000636045 103 ntBASIC3.37□□□□□ -1.87
SHISA3A0PJX4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHISA3A0PJX4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 SNORD114-7-201ENST00000362520 77 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RNU6-376P-201ENST00000384731 106 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 MIR526A2-201ENST00000390198 65 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RNA5SP252-201ENST00000391131 119 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 AP000567.1-201ENST00000406413 156 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RNU6-855P-201ENST00000410395 104 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RPL23AP62-201ENST00000463396 453 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RAC1P2-201ENST00000511164 579 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 AC107027.2-201ENST00000512197 115 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RN7SKP209-201ENST00000516888 304 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 HSPE1P18-201ENST00000517602 280 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 AL137849.1-201ENST00000604767 169 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 AC083809.1-201ENST00000615051 472 ntBASIC3.36□□□□□ -1.87
SHISA3A0PJX4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA3A0PJX4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 U1.1-201ENST00000384101 164 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 MIR29B2-201ENST00000385055 81 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.586-201ENST00000391146 98 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 AL445584.1-201ENST00000431451 330 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 AC006445.1-201ENST00000491925 405 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 RNU6-313P-201ENST00000516317 112 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 AL670379.2-201ENST00000604983 252 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 RMST_8.1-201ENST00000610287 165 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 MIR6830-201ENST00000636015 70 ntBASIC3.35□□□□□ -1.87
SHISA3A0PJX4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.35□□□□□ -1.87
SHISA3A0PJX4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHISA3A0PJX4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms