Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-776P-201ENST00000364403 104 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-1022P-201ENST00000365049 104 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 RNA5SP151-201ENST00000365632 117 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-198P-201ENST00000384258 104 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AL590004.2-201ENST00000404787 371 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 RPS29P17-201ENST00000430795 166 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AC107297.1-201ENST00000459991 176 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 RN7SL98P-201ENST00000462271 300 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AC007215.1-201ENST00000464893 276 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AC090525.1-201ENST00000479116 478 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 AC091152.3-201ENST00000604227 325 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 SNRPGP20-201ENST00000604477 205 ntBASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
DNMT3AQ9Y6K1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AC092435.4-201ENST00000623012 4159 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AL512633.1-201ENST00000399931 655 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AL603914.1-201ENST00000401964 204 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 MIR1263-201ENST00000408324 86 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.622-201ENST00000411091 108 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AC096649.2-201ENST00000416186 393 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AIG1P1-201ENST00000503376 148 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 MRPS36P2-201ENST00000512569 299 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AP000867.2-201ENST00000532468 320 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AC019288.1-201ENST00000557918 224 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 RN7SL176P-201ENST00000580352 264 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 MIR378D2-201ENST00000580636 98 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 SNORD98-201ENST00000636377 67 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 MIR3674-201ENST00000636576 68 ntBASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DNMT3AQ9Y6K1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
DNMT3AQ9Y6K1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.34□□□□□ -1.72
DNMT3AQ9Y6K1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
DNMT3AQ9Y6K1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
DNMT3AQ9Y6K1 AC106871.1-201ENST00000568324 3102 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RNU1-64P-201ENST00000365443 163 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 U3.40-201ENST00000408706 208 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RNA5SP146-201ENST00000410743 123 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 AC023141.4-201ENST00000412031 328 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RPL18P10-201ENST00000425606 538 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 SNORA71B-202ENST00000439232 272 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 PHBP16-201ENST00000446318 950 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 AC010099.1-201ENST00000455434 375 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RNU6-1018P-201ENST00000516577 106 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RNU6-158P-201ENST00000517104 100 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RNU2-12P-201ENST00000517216 168 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RPL23AP97-201ENST00000568955 471 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 MIR4277-201ENST00000578298 84 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 AC113403.1-201ENST00000604910 193 ntBASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
DNMT3AQ9Y6K1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 SNORA63.5-201ENST00000363548 123 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 SNORD45.3-201ENST00000363836 72 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 RNY1P1-201ENST00000364372 112 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 RNA5SP509-201ENST00000364577 119 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 Y_RNA.313-201ENST00000365095 103 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 Y_RNA.323-201ENST00000365157 109 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 RNU6-242P-201ENST00000384359 107 ntBASIC4.32□□□□□ -1.72
DNMT3AQ9Y6K1 RNU1-44P-201ENST00000384453 163 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms