Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 USP9YP23-201ENST00000455085 407 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 CYP2C59P-201ENST00000457790 269 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU7-87P-201ENST00000459343 62 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 AC007215.1-201ENST00000464893 276 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 TOMM22P6-201ENST00000465035 409 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 RPL23AP67-201ENST00000465341 474 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU4-77P-201ENST00000516692 156 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 HSBP1P1-201ENST00000555205 166 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 LARP7P3-201ENST00000579888 337 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR4513-201ENST00000581077 86 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 AC008121.3-201ENST00000618726 433 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR4272-201ENST00000635924 64 ntBASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGA3Q9Y5H0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 U8.10-201ENST00000384260 133 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-1093P-201ENST00000391194 107 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AL118496.2-201ENST00000448300 230 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU1-143P-201ENST00000516296 146 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC026470.2-201ENST00000561492 181 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR3199-1-201ENST00000582434 88 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 SNRPGP20-201ENST00000604477 205 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 U1.23-201ENST00000610293 146 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC040896.1-201ENST00000613819 479 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA3Q9Y5H0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 Y_RNA.510-201ENST00000384511 114 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR606-201ENST00000384851 96 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU1-139P-201ENST00000391307 165 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RNA5SP201-201ENST00000410316 124 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-1114P-201ENST00000516022 107 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-58P-201ENST00000517143 103 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AC093732.2-201ENST00000607950 274 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AL132822.1-201ENST00000617063 513 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
PCDHGA3Q9Y5H0 MTND5P16-201ENST00000460269 1703 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU4-15P-201ENST00000362613 141 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 Y_RNA.132-201ENST00000363421 102 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 Y_RNA.145-201ENST00000363527 102 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 Y_RNA.358-201ENST00000365491 99 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 SNORD14.1-201ENST00000365609 90 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-245P-201ENST00000384020 107 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AL356968.1-201ENST00000416622 474 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 COTL1P1-201ENST00000422309 375 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms