Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.36□□□□□ -1.71
RTCBQ9Y3I0 AL365265.1-201ENST00000621045 234 ntBASIC4.36□□□□□ -1.71
RTCBQ9Y3I0 MIR3529-201ENST00000637713 78 ntBASIC4.36□□□□□ -1.71
RTCBQ9Y3I0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RTCBQ9Y3I0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.36□□□□□ -1.71
RTCBQ9Y3I0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 CEP170P1-201ENST00000502249 4587 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 RNU6-50P-201ENST00000362356 103 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 RNU6-600P-201ENST00000362524 99 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 RNU4-47P-201ENST00000410876 114 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 BMS1P22-201ENST00000414726 313 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 AC012306.1-201ENST00000423267 114 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 RNU6-625P-201ENST00000459412 107 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 RPS27AP10-201ENST00000496103 208 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 AC055872.1-201ENST00000570978 278 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 MIR4727-201ENST00000622232 55 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 FAM35BP-202ENST00000497389 3337 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 MTND5P35-201ENST00000557537 1720 ntBASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCBQ9Y3I0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 RNU4-56P-201ENST00000364700 142 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 SNORA26.3-201ENST00000391119 136 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 SNRPGP5-201ENST00000456003 220 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 AC005921.1-201ENST00000510589 286 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 RNU6-191P-201ENST00000516295 94 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 AC018448.1-201ENST00000552843 316 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
RTCBQ9Y3I0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RTCBQ9Y3I0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 MIR422A-201ENST00000362286 90 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 RNU6-211P-201ENST00000384047 107 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 AL357139.1-201ENST00000407792 426 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 RPS29P31-201ENST00000446147 164 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 RPL39P29-201ENST00000447779 157 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 AC006445.1-201ENST00000491925 405 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 RNU6-581P-201ENST00000516214 105 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 RNA5SP468-201ENST00000516782 93 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 snoU18.1-201ENST00000629629 71 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 MTND1P7-201ENST00000632801 297 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTCBQ9Y3I0 USP8P1-201ENST00000494673 3183 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RBBP8P1-201ENST00000449447 1844 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 AC092593.1-201ENST00000515413 1815 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RNU6-653P-201ENST00000363074 106 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RNU4-80P-201ENST00000363200 141 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RNA5SP167-201ENST00000365461 116 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 Y_RNA.498-201ENST00000384460 102 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RNU6-1117P-201ENST00000384525 104 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 SNORA40.19-201ENST00000390846 128 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 Y_RNA.580-201ENST00000391004 95 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RNA5SP390-201ENST00000410191 113 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 HMGN2P10-201ENST00000448085 265 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTCBQ9Y3I0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 Y_RNA.101-201ENST00000363154 102 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 RNA5SP189-201ENST00000364920 115 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 SNORD50B-201ENST00000364995 70 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 RNA5SP129-201ENST00000410276 118 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms