Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 RNU6-4P-201ENST00000384205 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-5P-201ENST00000384238 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-3P-201ENST00000384314 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-16P-201ENST00000384385 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-15P-201ENST00000384534 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-636P-201ENST00000384598 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-2-201ENST00000384627 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-29P-201ENST00000384637 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-9-201ENST00000384776 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-33P-201ENST00000384793 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 SNORD115.1-201ENST00000391109 76 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 AP000275.1-201ENST00000411943 390 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 AC060773.1-201ENST00000421698 310 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 AC078809.1-201ENST00000427601 140 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 AL603825.1-201ENST00000438481 80 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 AC007547.1-201ENST00000462177 490 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 AC011406.1-201ENST00000512440 370 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNA5SP384-201ENST00000516615 116 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-685P-201ENST00000517088 95 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 EIF4A1P12-201ENST00000551910 141 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-6P-201ENST00000606623 107 ntBASIC0.68□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-1123P-201ENST00000362347 106 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 RNU1-76P-201ENST00000362903 159 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 U3.4-201ENST00000363352 213 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-336P-201ENST00000364891 107 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-157P-201ENST00000383957 107 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-378P-201ENST00000384324 107 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 MIR19B1-201ENST00000384829 87 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 PIGFP2-201ENST00000421400 651 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AC103851.1-201ENST00000506833 274 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AP003181.2-201ENST00000528941 181 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AC008015.1-201ENST00000555505 465 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AC090888.2-201ENST00000559765 1144 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AC078795.3-201ENST00000602913 472 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AL353149.1-201ENST00000610667 244 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 AL607023.1-201ENST00000620045 248 ntBASIC0.67□□□□□ -2.3
POLR1DQ9Y2S0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-660P-201ENST00000364566 109 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 SNORD32A-201ENST00000364805 84 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 Y_RNA.324-201ENST00000365165 102 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 RNU6-533P-201ENST00000384144 107 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 SNORA26.3-201ENST00000391119 136 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 ELOCP4-201ENST00000420090 333 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 GAPDHP17-201ENST00000449858 1001 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 RPS23P5-201ENST00000495419 428 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 SUMO2P16-201ENST00000519475 264 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.66□□□□□ -2.3
POLR1DQ9Y2S0 AC092268.1-201ENST00000342691 405 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 Y_RNA.18-201ENST00000362461 102 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 Y_RNA.22-201ENST00000362492 102 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-428P-201ENST00000362942 107 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-534P-201ENST00000364877 106 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-418P-201ENST00000384035 107 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-45P-201ENST00000384471 107 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-387P-201ENST00000411331 105 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 EXOSC3P1-201ENST00000448649 500 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC091435.1-201ENST00000505442 584 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC067942.3-201ENST00000512025 362 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC109446.2-201ENST00000567872 497 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC090517.1-201ENST00000569307 266 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 AC105148.1-201ENST00000604961 409 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 RPL17P51-201ENST00000605218 238 ntBASIC0.65□□□□□ -2.31
POLR1DQ9Y2S0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-552P-201ENST00000362869 119 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 RNU6-179P-201ENST00000363350 107 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 SNORA72.2-201ENST00000365028 127 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 MRPL42P2-201ENST00000403169 426 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
POLR1DQ9Y2S0 USP9YP28-201ENST00000435142 589 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms