Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 U7.2-201ENST00000607576 63 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 AC018692.3-201ENST00000623929 123 ntBASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HIF3AQ9Y2N7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-235P-201ENST00000362644 107 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 RNA5SP447-201ENST00000363749 119 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 SNORA22-201ENST00000383907 134 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC245291.1-201ENST00000419501 328 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC027124.2-201ENST00000428249 105 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AL357134.1-201ENST00000445848 426 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AL441985.1-201ENST00000457727 251 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC016925.1-201ENST00000458303 298 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 Y_RNA.709-201ENST00000516952 92 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 RPS15AP11-201ENST00000594193 385 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 SNORD11B-201ENST00000607707 90 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AL391903.3-201ENST00000612158 163 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 AL445567.2-201ENST00000618935 498 ntBASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIF3AQ9Y2N7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-1144P-201ENST00000384247 104 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RNA5SP201-201ENST00000410316 124 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-710P-201ENST00000410424 105 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AL714022.1-201ENST00000439897 151 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RNA5SP246-201ENST00000458909 119 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 snoU13.1-201ENST00000459157 104 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AC109327.1-201ENST00000471666 403 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RPL30P14-201ENST00000482744 348 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 RN7SKP179-201ENST00000516126 217 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 MIR4679-2-201ENST00000578358 77 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AL031274.2-201ENST00000599419 203 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AC008745.1-201ENST00000604064 271 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AL670379.2-201ENST00000604983 252 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 PCGEM1.1-201ENST00000613431 131 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 AC002076.2-201ENST00000617362 122 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 MAPK10-372ENST00000641954 3413 ntBASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.74□□□□□ -1.81
HIF3AQ9Y2N7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 MIR367-201ENST00000362299 68 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-529P-201ENST00000363383 104 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 RNU1-32P-201ENST00000363937 159 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 SNORA62-201ENST00000365493 153 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 MIR526A2-201ENST00000390198 65 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 SNORA3C-201ENST00000408792 125 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 RNU6-383P-201ENST00000410864 94 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC004552.1-201ENST00000419089 348 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC004386.2-201ENST00000441858 148 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 snoU13.14-201ENST00000459372 104 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 RPS26P3-201ENST00000470205 348 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 PPIAP15-201ENST00000479662 484 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC090543.2-201ENST00000483963 348 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC004057.1-201ENST00000485827 348 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 CYCSP26-201ENST00000534107 320 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC090049.2-201ENST00000550377 109 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AP001340.1-201ENST00000624405 217 ntBASIC3.73□□□□□ -1.81
HIF3AQ9Y2N7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms