Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNU6-102P-201ENST00000384485 104 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 MIR489-201ENST00000384923 84 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 RNU6-821P-201ENST00000390995 107 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.592-201ENST00000410274 109 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 RHEBP3-201ENST00000411920 351 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC092447.6-201ENST00000414578 210 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AL137159.1-201ENST00000452808 512 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC006539.3-201ENST00000454258 129 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 SNORD2.1-201ENST00000458762 69 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 snoU13.30-201ENST00000458951 104 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC010683.1-201ENST00000473673 378 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 RPS29P21-201ENST00000496272 170 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 RNU6-798P-201ENST00000516912 103 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC068657.1-201ENST00000520807 306 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 OR4H12P-201ENST00000556269 907 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 MIR4282-201ENST00000583613 67 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 NF1P5-201ENST00000588287 448 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.772-201ENST00000606692 102 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC009318.2-201ENST00000610917 651 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC240442.1-201ENST00000616055 283 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC100821.1-201ENST00000523153 2479 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 MFSD8-233ENST00000641482 4860 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 U8.2-201ENST00000363156 134 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.331-201ENST00000365267 102 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RNU6-449P-201ENST00000383914 107 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.418-201ENST00000384029 102 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.568-201ENST00000384742 113 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AL357139.1-201ENST00000407792 426 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RPL23AP36-201ENST00000413895 458 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AP000936.3-201ENST00000438127 255 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RNU7-87P-201ENST00000459343 62 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RPL37P6-201ENST00000460682 294 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RPS29P27-201ENST00000463711 170 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 SUMO2P6-201ENST00000505273 288 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RNY3P16-201ENST00000516338 101 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RNU6-1234P-201ENST00000516877 103 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC109329.2-201ENST00000519658 482 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC023824.2-201ENST00000566185 400 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC104581.2-201ENST00000572227 430 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC008749.1-201ENST00000597650 306 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.71-201ENST00000362892 104 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 SNORD56.3-201ENST00000363507 71 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.233-201ENST00000364407 101 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RNU6-215P-201ENST00000365169 102 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RPL37P6-202ENST00000464216 403 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RPL30P1-201ENST00000488676 339 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC090616.3-201ENST00000582184 217 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC098826.3-201ENST00000603823 466 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC110741.2-201ENST00000605278 268 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 AC004852.3-201ENST00000614131 326 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 RMST_4.1-201ENST00000616886 107 ntBASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NOTCH3Q9UM47 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
NOTCH3Q9UM47 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.23-201ENST00000362496 106 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 SNORA63.4-201ENST00000362763 126 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNA5SP68-201ENST00000363885 119 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNU4-56P-201ENST00000364700 142 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNU6-937P-201ENST00000384325 106 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RPL23AP48-201ENST00000406913 488 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 MIR1287-201ENST00000408492 90 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.597-201ENST00000410463 100 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 RNU2-61P-201ENST00000411069 191 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 SNORD56-201ENST00000413522 71 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC024067.1-201ENST00000426199 223 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AL591043.1-201ENST00000432461 424 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AC087499.2-201ENST00000432861 149 ntBASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.21□□□□□ -2.06
NOTCH3Q9UM47 SNORD109B-201ENST00000458961 67 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms