Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC069257.2-201ENST00000441819 155 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 CENPUP1-201ENST00000526649 1202 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC068587.4-201ENST00000533893 186 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 MIR5692A1-201ENST00000580523 69 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AL596327.1-201ENST00000603629 213 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC090578.1-201ENST00000604955 591 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AL356157.2-201ENST00000605122 111 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 RPL17P51-201ENST00000605218 238 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 Y_RNA.167-201ENST00000363735 109 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-439P-201ENST00000384188 106 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AL669831.1-202ENST00000428504 417 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC073910.1-201ENST00000445047 438 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 RPS23P5-201ENST00000495419 428 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC091163.3-201ENST00000518269 1144 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC023050.2-201ENST00000544968 387 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC087883.1-201ENST00000551882 391 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 MIR5589-201ENST00000579442 60 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 AL391001.1-201ENST00000602747 715 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-1192P-201ENST00000612197 107 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-489P-201ENST00000618289 107 ntBASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
PHRF1Q9P1Y6 RNU4-15P-201ENST00000362613 141 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 RNU4-56P-201ENST00000364700 142 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-1065P-201ENST00000384513 106 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 MIR100-201ENST00000385259 80 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 RPS3AP36-201ENST00000398190 775 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AL117342.1-201ENST00000404861 406 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 RAP1BP3-201ENST00000407180 549 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 Z99497.1-201ENST00000421282 135 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AL353777.1-201ENST00000425552 326 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AL008629.1-201ENST00000438615 184 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC243964.1-201ENST00000441814 261 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 MTND5P2-201ENST00000442927 1142 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 snoU13.30-201ENST00000458951 104 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 TRBVB-201ENST00000477100 408 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC119751.4-201ENST00000507498 357 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC116353.3-201ENST00000511215 249 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 PSMC1P5-201ENST00000512850 177 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 Y_RNA.687-201ENST00000516558 91 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-1003P-201ENST00000517099 105 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 MTCO2P2-201ENST00000591258 225 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC144521.1-201ENST00000607148 956 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC120349.3-201ENST00000624377 529 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 AC092104.1-201ENST00000497346 1441 ntBASIC0.43□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-621P-201ENST00000364752 109 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 SNORA75B-201ENST00000384053 137 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-298P-201ENST00000390888 96 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 SNORA12-201ENST00000391162 147 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 USP9YP11-201ENST00000427537 717 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC078809.1-201ENST00000427601 140 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 MTCO3P29-201ENST00000432119 779 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 RPS26P45-201ENST00000471748 340 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AL442163.3-201ENST00000554110 156 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 MIR3923-201ENST00000579521 83 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC068790.6-201ENST00000602558 258 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-511P-201ENST00000363496 107 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 SNORD114-24-201ENST00000365029 72 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-1179P-201ENST00000384667 107 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 MIR200A-201ENST00000384875 90 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AL136310.1-201ENST00000404926 654 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-293P-201ENST00000411259 106 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 COX6CP10-201ENST00000416832 224 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC112206.3-201ENST00000514578 389 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 SUMO2P16-201ENST00000519475 264 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC011979.2-201ENST00000527568 352 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC069114.2-201ENST00000604699 304 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC121334.2-201ENST00000605387 271 ntBASIC0.42□□□□□ -2.34
PHRF1Q9P1Y6 AC004492.1-201ENST00000607036 742 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms