Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 AP005136.1-201ENST00000579765 429 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HPF1Q9NWY4 MIR8081-201ENST00000611533 95 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 AC072046.2-201ENST00000618366 268 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
HPF1Q9NWY4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HPF1Q9NWY4 RNA5SP190-201ENST00000365222 118 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 RNU6-1106P-201ENST00000390845 107 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 SNORA12.2-201ENST00000391040 156 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC244505.5-201ENST00000443639 207 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC245517.4-201ENST00000448601 281 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC007547.1-201ENST00000462177 490 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC008628.2-201ENST00000502605 298 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC091874.1-201ENST00000511402 339 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC105417.1-201ENST00000514691 285 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AL137161.1-201ENST00000532231 390 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC064807.4-201ENST00000607201 407 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AP001596.2-201ENST00000608410 312 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC091304.6-201ENST00000619761 202 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC136475.10-201ENST00000620253 385 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AC068205.3-201ENST00000636385 468 ntBASIC1.6□□□□□ -2.15
HPF1Q9NWY4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HPF1Q9NWY4 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 RNU1-76P-201ENST00000362903 159 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 RNU1-17P-201ENST00000363022 152 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 AP000275.1-201ENST00000411943 390 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 HSPE1P9-201ENST00000440046 311 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 C1DP4-201ENST00000455429 424 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 RPL26P26-201ENST00000480251 434 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 RPS23P5-201ENST00000495419 428 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.59□□□□□ -2.15
HPF1Q9NWY4 MIR3913-1-201ENST00000577744 102 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.59□□□□□ -2.15
HPF1Q9NWY4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.59□□□□□ -2.15
HPF1Q9NWY4 RNU6-85P-201ENST00000605989 107 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 AC009994.1-201ENST00000606889 253 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 AL450472.1-202ENST00000637286 180 ntBASIC1.59□□□□□ -2.15
HPF1Q9NWY4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
HPF1Q9NWY4 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.16
HPF1Q9NWY4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 RNU6-271P-201ENST00000363858 105 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 RNU6-517P-201ENST00000384362 110 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 RNU6-360P-201ENST00000390944 104 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 MTCO1P21-201ENST00000416634 589 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 MTND4P32-201ENST00000437189 1237 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AL356010.1-201ENST00000456364 102 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC079140.3-201ENST00000511111 550 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 RN7SKP219-201ENST00000516825 296 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC012414.6-201ENST00000568241 401 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC109347.2-201ENST00000610220 349 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC005520.5-201ENST00000613926 164 ntBASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HPF1Q9NWY4 AC010615.1-201ENST00000594254 1764 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AC100821.1-201ENST00000523153 2479 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 SNORA36A-201ENST00000384221 132 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AC010531.2-201ENST00000465012 153 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 RPS26P55-201ENST00000471178 356 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AL163973.1-201ENST00000484753 577 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 RNA5SP481-201ENST00000516814 122 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 SNORA77B-201ENST00000578179 125 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 AC025449.1-201ENST00000603896 529 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 Z94722.1-201ENST00000604328 474 ntBASIC1.57□□□□□ -2.16
HPF1Q9NWY4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HPF1Q9NWY4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 RNU6-862P-201ENST00000362804 105 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 RNU6-1120P-201ENST00000362988 108 ntBASIC1.56□□□□□ -2.16
HPF1Q9NWY4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.56□□□□□ -2.16
HPF1Q9NWY4 MTATP6P18-201ENST00000417994 673 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms