Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC006566.1-201ENST00000608943 513 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 U3.9-201ENST00000363823 204 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 Y_RNA.480-201ENST00000384364 102 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MTCYBP2-201ENST00000407745 171 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MIR1267-201ENST00000408723 78 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 RNU6-321P-201ENST00000410912 106 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 RNU2-41P-201ENST00000410991 178 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AP000275.1-201ENST00000411943 390 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AP1B1P2-201ENST00000416196 106 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MTND3P17-201ENST00000416968 344 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC078809.1-201ENST00000427601 140 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AL022238.1-201ENST00000442557 355 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AL133217.1-201ENST00000450980 425 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 RNU7-14P-201ENST00000459331 62 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 ATP5EP1-201ENST00000510257 156 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 SUMO2P18-201ENST00000518873 252 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AP001372.4-201ENST00000524889 472 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MIR4703-201ENST00000577728 79 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MIR3915-201ENST00000578518 97 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 RSL24D1P11-201ENST00000591045 491 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC245014.2-201ENST00000603689 287 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC246785.4-201ENST00000605374 287 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC002044.1-201ENST00000606707 158 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AL121890.5-201ENST00000620848 304 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC022513.1-201ENST00000624512 117 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MTND4P14-201ENST00000435799 1354 ntBASIC1.2□□□□□ -2.22
TREX1Q9NSU2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TREX1Q9NSU2 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RNU4-48P-201ENST00000365559 182 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 SNORA32.2-201ENST00000384049 122 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 Y_RNA.504-201ENST00000384481 104 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RPS27AP8-201ENST00000452665 445 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RPL31P3-201ENST00000458430 332 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RNA5SP269-201ENST00000459032 137 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC087477.1-201ENST00000465747 340 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC079382.1-201ENST00000493346 557 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.19□□□□□ -2.22
TREX1Q9NSU2 MTCO3P28-201ENST00000513351 515 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RNU2-69P-201ENST00000516061 100 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 Y_RNA.673-201ENST00000516306 88 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AP003072.2-201ENST00000527756 676 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC078795.3-201ENST00000602913 472 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 AC064872.1-201ENST00000604823 1072 ntBASIC1.19□□□□□ -2.22
TREX1Q9NSU2 RNU6-552P-201ENST00000362869 119 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 SNORD32A-201ENST00000364805 84 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 MT-TH-201ENST00000387441 69 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 RN7SKP61-201ENST00000410642 295 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC013470.1-201ENST00000453438 462 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC022364.2-201ENST00000457963 554 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 SCARNA18-201ENST00000459004 134 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 MTCO2P6-201ENST00000463134 685 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 TOMM22P6-201ENST00000465035 409 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 RPL36AP21-201ENST00000490372 323 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC016632.1-201ENST00000503994 196 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 MTND1P22-201ENST00000510572 951 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 RN7SKP287-201ENST00000516546 266 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AP003034.1-201ENST00000534621 422 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 MTND1P24-201ENST00000552175 861 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC021231.3-201ENST00000558497 370 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 MIR4781-201ENST00000585250 76 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC093424.1-201ENST00000604999 338 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 PCGEM1.1-201ENST00000613431 131 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AC083806.3-201ENST00000614016 455 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 uc_338.11-201ENST00000619132 160 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 MIR8063-201ENST00000621930 81 ntBASIC1.18□□□□□ -2.22
TREX1Q9NSU2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TREX1Q9NSU2 AL159152.1-201ENST00000635019 2587 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 AC092268.1-201ENST00000342691 405 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 MIR340-201ENST00000362125 95 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNU6-271P-201ENST00000363858 105 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNU6-282P-201ENST00000365357 103 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNU6-378P-201ENST00000384324 107 ntBASIC1.17□□□□□ -2.22
TREX1Q9NSU2 RNU6-1026P-201ENST00000384465 108 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms