Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 AC004383.1-201ENST00000438135 289 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AC009969.1-201ENST00000438726 172 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 snoU13.30-201ENST00000458951 104 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AP000870.1-201ENST00000472927 406 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 SCARNA24.2-201ENST00000516968 130 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AC022868.1-201ENST00000517767 391 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AC093023.1-201ENST00000547375 507 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AC012468.1-201ENST00000604888 430 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 MIR3199-2-201ENST00000636243 86 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AC233981.2-201ENST00000611524 1614 ntBASIC2.86□□□□□ -1.95
NRIP3Q9NQ35 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 MIR335-201ENST00000362173 94 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 Y_RNA.54-201ENST00000362766 105 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 U3.13-201ENST00000364804 214 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 Y_RNA.286-201ENST00000364813 102 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 Y_RNA.439-201ENST00000384119 94 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 RNU6-17P-201ENST00000384245 107 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 RNU6-18P-201ENST00000384527 107 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 MIR490-201ENST00000384865 128 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 SNORD58.1-201ENST00000391313 66 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 PIGPP3-201ENST00000425307 415 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 HSPE1P25-201ENST00000455484 251 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 RNU7-175P-201ENST00000515915 61 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 AC023632.4-201ENST00000517783 191 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 AC090617.3-201ENST00000573670 475 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 MIR4659A-201ENST00000580269 81 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 MIR3616-201ENST00000584070 92 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 AC024153.1-201ENST00000603103 365 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 SCARNA4-202ENST00000625402 129 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 SCARNA4-201ENST00000629045 128 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 AC008264.2-201ENST00000610193 3731 ntBASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NRIP3Q9NQ35 AC093010.3-201ENST00000570269 15214 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 LINC02555-201ENST00000563933 1951 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU6-1266P-201ENST00000362794 105 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 Y_RNA.117-201ENST00000363294 101 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 SNORD113-8-201ENST00000363497 74 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU1-140P-201ENST00000365040 165 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU1-100P-201ENST00000365255 165 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU6-968P-201ENST00000384076 107 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 SNORD116-20-201ENST00000384529 92 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 MIR32-201ENST00000384965 70 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 Y_RNA.581-201ENST00000391017 97 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 PCNPP3-201ENST00000393579 471 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 FTH1P15-201ENST00000406984 280 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 MTCYBP2-201ENST00000407745 171 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC023141.4-201ENST00000412031 328 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 EIF1P2-201ENST00000428233 350 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC244505.4-201ENST00000434905 287 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 SSXP5-201ENST00000443473 287 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 MTATP6P7-201ENST00000453315 681 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 PRELID3BP1-201ENST00000457142 540 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC008155.2-201ENST00000464337 397 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RPL21P129-201ENST00000491732 478 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RPS27AP10-201ENST00000496103 208 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU6-496P-201ENST00000516145 99 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RNU5B-3P-201ENST00000516601 115 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC010186.2-204ENST00000537668 439 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 UBL5P4-201ENST00000562584 236 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 AC243829.7-201ENST00000633081 225 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.84□□□□□ -1.95
NRIP3Q9NQ35 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
NRIP3Q9NQ35 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
NRIP3Q9NQ35 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 Y_RNA.76-201ENST00000362931 109 ntBASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 RNU6-527P-201ENST00000363425 104 ntBASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 RNY1-201ENST00000364228 113 ntBASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 RNU4-9P-201ENST00000364951 139 ntBASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 RNU6-1286P-201ENST00000383871 107 ntBASIC2.83□□□□□ -1.96
NRIP3Q9NQ35 SNORA29-201ENST00000384183 140 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms