Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MTCO3P40-201ENST00000392516 676 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 RNU6-1068P-201ENST00000410958 103 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 RPL23AP95-201ENST00000426806 265 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 CBX3P6-201ENST00000430257 527 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 RNU6-189P-201ENST00000516120 101 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 CENPUP1-201ENST00000526649 1202 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC115990.1-201ENST00000526957 301 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AK6P1-201ENST00000540219 478 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC025423.5-201ENST00000550230 219 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AL160236.1-201ENST00000556317 195 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC109446.1-201ENST00000566172 220 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 NBR2-204ENST00000587322 63 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC092954.2-201ENST00000609103 430 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC013412.1-201ENST00000610687 192 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 MIR6845-201ENST00000613182 61 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC124864.2-201ENST00000624736 186 ntBASIC1.39□□□□□ -2.19
HMG20AQ9NP66 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.39□□□□□ -2.19
HMG20AQ9NP66 SNORD114-6-201ENST00000364393 72 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 Y_RNA.372-201ENST00000365599 102 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 RNU6-142P-201ENST00000384019 107 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 RNU6-378P-201ENST00000384324 107 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 Y_RNA.559-201ENST00000384686 107 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 RN7SKP61-201ENST00000410642 295 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AL158823.1-201ENST00000418441 478 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC244636.1-201ENST00000421152 228 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AL590556.1-201ENST00000423231 483 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 HMGN2P18-201ENST00000450680 270 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 MTND3P16-201ENST00000452205 344 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 RNU7-138P-201ENST00000459479 64 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 SRRM1P2-201ENST00000464531 1192 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC027575.1-201ENST00000481064 460 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 RNU6-323P-201ENST00000521915 107 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AP000889.1-201ENST00000530968 660 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AP003034.1-201ENST00000534621 422 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.38□□□□□ -2.19
HMG20AQ9NP66 MIR5692C1-201ENST00000585309 91 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 MIR502-201ENST00000606349 86 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AL357078.3-201ENST00000607528 618 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 MIR8081-201ENST00000611533 95 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 AC103705.1-201ENST00000619013 241 ntBASIC1.38□□□□□ -2.19
HMG20AQ9NP66 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AL356292.1-201ENST00000283110 373 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 RNU6-1042P-201ENST00000384204 107 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 RNU6-648P-201ENST00000410190 107 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 RNA5SP501-201ENST00000410990 112 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 RNU2-41P-201ENST00000410991 178 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 SRIP3-201ENST00000413200 219 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 Z83846.1-201ENST00000446798 265 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AC107401.1-201ENST00000503426 685 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AC022447.4-201ENST00000504053 364 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 ATP5EP1-201ENST00000510257 156 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 RNU6-1069P-201ENST00000516612 133 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 VN1R107P-201ENST00000601784 209 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 Z98751.3-201ENST00000604447 521 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AC092807.2-201ENST00000609367 243 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AC048344.4-201ENST00000619744 527 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 AL359880.1-201ENST00000621879 266 ntBASIC1.37□□□□□ -2.19
HMG20AQ9NP66 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMG20AQ9NP66 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HMG20AQ9NP66 RNU1-58P-201ENST00000362413 163 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 RNU6-1085P-201ENST00000363576 107 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 RNU6-1322P-201ENST00000364309 107 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 SNORA12.2-201ENST00000391040 156 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 SNORA26.3-201ENST00000391119 136 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 AL627390.1-201ENST00000396055 340 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 MTCYBP2-201ENST00000407745 171 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 RNA5SP201-201ENST00000410316 124 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 RNU2-16P-201ENST00000410712 136 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.36□□□□□ -2.19
HMG20AQ9NP66 AL358453.1-201ENST00000422522 250 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 AC078809.1-201ENST00000427601 140 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 TIMM9P3-201ENST00000428659 274 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 MTND3P9-201ENST00000429526 346 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 MTCO2P3-201ENST00000442543 421 ntBASIC1.36□□□□□ -2.19
HMG20AQ9NP66 AC083904.1-201ENST00000487828 231 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms