Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU6-338P-201ENST00000383888 105 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1119P-201ENST00000384349 108 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RNU6-692P-201ENST00000384496 107 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 MIR1287-201ENST00000408492 90 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC073464.1-201ENST00000429823 534 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 USP9YP14-201ENST00000430663 563 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC002486.1-201ENST00000435098 391 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC092473.1-201ENST00000441098 221 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AL031274.1-201ENST00000450334 232 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC022364.2-201ENST00000457963 554 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RPL31P3-201ENST00000458430 332 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RNU7-63P-201ENST00000459054 62 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 CCDC34P1-201ENST00000507441 517 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RN7SKP298-201ENST00000515950 94 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC115990.1-201ENST00000526957 301 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 HIF1AP1-201ENST00000553642 175 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC103987.3-201ENST00000582071 292 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC107304.1-201ENST00000604229 296 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AL354950.2-201ENST00000617939 290 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 MIR1248-201ENST00000629190 106 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 Y_RNA.67-201ENST00000362870 100 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1120P-201ENST00000362988 108 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU6-266P-201ENST00000364225 107 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU6-336P-201ENST00000364891 107 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNA5SP100-201ENST00000410903 110 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNA5SP59-201ENST00000410922 110 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU6-293P-201ENST00000411259 106 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AL606489.2-201ENST00000433886 234 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC243964.1-201ENST00000441814 261 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 MTND2P22-201ENST00000444325 1033 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC073415.1-201ENST00000449240 153 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 SNRPFP3-201ENST00000457792 225 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RNU6-333P-201ENST00000459117 107 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC108078.1-201ENST00000508073 725 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 RPL39P5-202ENST00000512505 151 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC087441.2-201ENST00000529141 262 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC023050.3-201ENST00000541142 333 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC103996.1-201ENST00000555468 102 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AP001596.2-201ENST00000608410 312 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TM9SF3Q9HD45 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 Y_RNA.1-201ENST00000352915 104 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 RNU6-996P-201ENST00000365438 107 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 RNU6-434P-201ENST00000384376 107 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 RNU4-55P-201ENST00000410731 137 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 RNU7-180P-201ENST00000459240 63 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 AC132942.1-201ENST00000486753 483 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 RNU6-377P-201ENST00000515965 102 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 AP001893.2-201ENST00000526949 202 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 AC245060.5-201ENST00000610778 3293 ntBASIC1.61□□□□□ -2.15
TM9SF3Q9HD45 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 RNA5SP493-201ENST00000364115 91 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 RNU6-827P-201ENST00000365553 106 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 SNORD73A-201ENST00000386062 65 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 SNORA12-201ENST00000391162 147 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 RNU2-29P-201ENST00000410423 189 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1245P-201ENST00000411130 106 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AL357134.1-201ENST00000445848 426 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AL356010.1-201ENST00000456364 102 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 snoU13.9-201ENST00000458927 103 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC096745.1-201ENST00000509945 370 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC009646.1-201ENST00000510455 318 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC025465.3-201ENST00000510570 311 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 MIR449C-201ENST00000516047 92 ntBASIC1.6□□□□□ -2.15
TM9SF3Q9HD45 RNU5F-2P-201ENST00000516066 82 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms