Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RPEP3-201ENST00000425462 676 ntBASIC7.79□□□□□ -1.16
SENP3Q9H4L4 AP001362.1-201ENST00000625165 124 ntBASIC7.79□□□□□ -1.16
SENP3Q9H4L4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SENP3Q9H4L4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
SENP3Q9H4L4 AC239868.2-201ENST00000564237 4527 ntBASIC7.79□□□□□ -1.16
SENP3Q9H4L4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SENP3Q9H4L4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.78□□□□□ -1.16
SENP3Q9H4L4 OR14L1P-202ENST00000641545 3009 ntBASIC7.78□□□□□ -1.16
SENP3Q9H4L4 AC245047.7-201ENST00000440265 293 ntBASIC7.78□□□□□ -1.16
SENP3Q9H4L4 AL691482.2-201ENST00000457453 84 ntBASIC7.78□□□□□ -1.16
SENP3Q9H4L4 RNU6-1057P-201ENST00000517162 102 ntBASIC7.78□□□□□ -1.16
SENP3Q9H4L4 RNA5SP373-201ENST00000517271 95 ntBASIC7.78□□□□□ -1.16
SENP3Q9H4L4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SENP3Q9H4L4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SENP3Q9H4L4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
SENP3Q9H4L4 AC009779.8-201ENST00000641684 4384 ntBASIC7.78□□□□□ -1.16
SENP3Q9H4L4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SENP3Q9H4L4 AP003122.5-201ENST00000527668 3766 ntBASIC7.77□□□□□ -1.17
SENP3Q9H4L4 RNA5SP455-201ENST00000365190 119 ntBASIC7.77□□□□□ -1.17
SENP3Q9H4L4 RNU2-7P-201ENST00000410794 178 ntBASIC7.77□□□□□ -1.17
SENP3Q9H4L4 RNU6-1086P-201ENST00000410930 100 ntBASIC7.77□□□□□ -1.17
SENP3Q9H4L4 REREP1Y-201ENST00000422655 198 ntBASIC7.77□□□□□ -1.17
SENP3Q9H4L4 RNU7-67P-201ENST00000459003 62 ntBASIC7.77□□□□□ -1.17
SENP3Q9H4L4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SENP3Q9H4L4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SENP3Q9H4L4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SENP3Q9H4L4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SENP3Q9H4L4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SENP3Q9H4L4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 AC110716.2-201ENST00000563865 3945 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 SUPT16HP1-201ENST00000537175 3133 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 RNU7-94P-201ENST00000459576 63 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 AL592156.1-201ENST00000508758 304 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 AC126615.2-201ENST00000553003 515 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 MIR4270-201ENST00000581799 70 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 MIR6715B-201ENST00000637172 77 ntBASIC7.76□□□□□ -1.17
SENP3Q9H4L4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SENP3Q9H4L4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 SNORD114-10-201ENST00000363409 72 ntBASIC7.75□□□□□ -1.17
SENP3Q9H4L4 RNU6-283P-201ENST00000364788 107 ntBASIC7.75□□□□□ -1.17
SENP3Q9H4L4 AC008171.1-201ENST00000395058 200 ntBASIC7.75□□□□□ -1.17
SENP3Q9H4L4 HSPE1P26-201ENST00000405341 275 ntBASIC7.75□□□□□ -1.17
SENP3Q9H4L4 AC007336.1-201ENST00000576365 3828 ntBASIC7.75□□□□□ -1.17
SENP3Q9H4L4 MIR4536-1-201ENST00000583537 88 ntBASIC7.75□□□□□ -1.17
SENP3Q9H4L4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SENP3Q9H4L4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.74□□□□□ -1.17
SENP3Q9H4L4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SENP3Q9H4L4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
SENP3Q9H4L4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.74□□□□□ -1.17
SENP3Q9H4L4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
SENP3Q9H4L4 MIR124-3-201ENST00000384866 87 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 MIR105-1-201ENST00000385222 81 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 COX6B1P1-201ENST00000415962 213 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 IFNWP4-201ENST00000453148 294 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 RNU6-965P-201ENST00000516721 96 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 AC104996.3-201ENST00000590718 94 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 CTSLP2-204ENST00000629029 392 ntBASIC7.74□□□□□ -1.17
SENP3Q9H4L4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
SENP3Q9H4L4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SENP3Q9H4L4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
SENP3Q9H4L4 RNA5SP223-201ENST00000365174 120 ntBASIC7.73□□□□□ -1.17
SENP3Q9H4L4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC7.73□□□□□ -1.17
SENP3Q9H4L4 AC007161.1-204ENST00000423039 460 ntBASIC7.73□□□□□ -1.17
SENP3Q9H4L4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.73□□□□□ -1.17
SENP3Q9H4L4 RNU7-137P-201ENST00000516788 62 ntBASIC7.73□□□□□ -1.17
SENP3Q9H4L4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC7.73□□□□□ -1.17
SENP3Q9H4L4 MIR1248-201ENST00000629190 106 ntBASIC7.73□□□□□ -1.17
SENP3Q9H4L4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC7.73□□□□□ -1.17
SENP3Q9H4L4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SENP3Q9H4L4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC7.73□□□□□ -1.17
SENP3Q9H4L4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 SNORD116-24-201ENST00000384549 92 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 RPL11P3-201ENST00000395256 523 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 AL450023.3-201ENST00000440592 271 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 AC068522.1-201ENST00000482895 345 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 uc_338.14-201ENST00000613162 166 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 AC091905.4-201ENST00000623432 202 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.72□□□□□ -1.17
SENP3Q9H4L4 AL137141.1-201ENST00000624622 4836 ntBASIC7.72□□□□□ -1.17
SENP3Q9H4L4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SENP3Q9H4L4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms