Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 EIF4EP4-201ENST00000424916 578 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 RPS15AP7-201ENST00000439294 405 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 AC140059.1-201ENST00000489238 361 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 AC026241.1-201ENST00000517873 2142 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 AP002404.1-201ENST00000532005 451 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 AP002770.2-201ENST00000543613 532 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 MIR3200-201ENST00000580767 85 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 AC004832.5-201ENST00000608677 401 ntBASIC3.57□□□□□ -1.84
CCDC113Q9H0I3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 MAPK10-362ENST00000641864 4484 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 Y_RNA.144-201ENST00000363521 113 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 RNY3P4-201ENST00000384428 101 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 RNU6-159P-201ENST00000391080 106 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 MIR1302-3-201ENST00000408128 138 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AL445305.1-201ENST00000432577 575 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC091179.1-201ENST00000461606 579 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC145146.1-201ENST00000496370 254 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 RN7SKP57-201ENST00000517248 293 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 UBL5P4-201ENST00000562584 236 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AP000942.4-201ENST00000604811 241 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 MIR8057-201ENST00000620957 69 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC090517.3-201ENST00000625170 141 ntBASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC113Q9H0I3 ZNF204P-201ENST00000416749 2397 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AC069528.2-201ENST00000624849 1991 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 SNORD115-8-201ENST00000363856 82 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 SNORD115-38-201ENST00000365037 82 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 RNU6-196P-201ENST00000384315 107 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 RNU6-378P-201ENST00000384324 107 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 MIR218-1-201ENST00000384999 110 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 RNU4-47P-201ENST00000410876 114 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 EIF1P2-201ENST00000428233 350 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AC109925.1-201ENST00000478069 331 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 RPL23AP70-201ENST00000483361 460 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 SNORA64.4-201ENST00000516632 81 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 SNORA40.15-201ENST00000516884 107 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 PRR13P7-201ENST00000605538 430 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AL121655.1-201ENST00000605811 308 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AC005520.5-201ENST00000613926 164 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC113Q9H0I3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 RNU4-15P-201ENST00000362613 141 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 U3.9-201ENST00000363823 204 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 MIR491-201ENST00000384877 84 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 MIR10B-201ENST00000385011 110 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 MIR548F4-201ENST00000408515 105 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 AC096638.1-201ENST00000444678 216 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 RNU6-397P-201ENST00000516226 104 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 SNORA70.24-201ENST00000517233 118 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 HSPE1P18-201ENST00000517602 280 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 AC093023.1-201ENST00000547375 507 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 SNRPGP20-201ENST00000604477 205 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.54□□□□□ -1.84
CCDC113Q9H0I3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 RNA5SP374-201ENST00000362939 125 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 SNORA38.1-201ENST00000364172 131 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 SNORD78.2-201ENST00000391076 69 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 RPL23AP83-201ENST00000434984 473 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 AC073910.1-201ENST00000445047 438 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 AC010655.3-201ENST00000478818 450 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 MTCO2P24-201ENST00000515611 426 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 RNY3P15-201ENST00000516297 97 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 SNORA25.14-201ENST00000516481 132 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms