Protein–RNA interactions for Protein: Q9C009

FOXQ1, Forkhead box protein Q1, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXQ1Q9C009 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RNU1-62P-201ENST00000362599 164 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 Y_RNA.81-201ENST00000362997 102 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 Y_RNA.238-201ENST00000364441 102 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RNU6-818P-201ENST00000364837 108 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 Y_RNA.400-201ENST00000383963 111 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 SNORA18.3-201ENST00000384122 132 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 Y_RNA.500-201ENST00000384466 111 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 SNORA1.3-201ENST00000384676 136 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RNU6-417P-201ENST00000384712 107 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 MIR320B2-201ENST00000408479 138 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RNA5SP475-201ENST00000410568 110 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RPL23AP82-202ENST00000427528 469 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 SEPT7P4-201ENST00000437076 306 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 AC103975.1-201ENST00000482506 483 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RNU6-313P-201ENST00000516317 112 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 RNU6-62P-201ENST00000516526 102 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 GNRHR2P1-201ENST00000555315 631 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 MIR3923-201ENST00000579521 83 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 MIR4513-201ENST00000581077 86 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 SNRPGP20-201ENST00000604477 205 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 YPEL5P2-201ENST00000605553 359 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 AC005520.5-201ENST00000613926 164 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.73□□□□□ -1.81
FOXQ1Q9C009 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXQ1Q9C009 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AC011266.1-201ENST00000624119 3569 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 RNU4-35P-201ENST00000362588 141 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 Y_RNA.215-201ENST00000364204 112 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 SNORA22C-201ENST00000384614 134 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 RNU6-1154P-201ENST00000391001 104 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 RNU6-1248P-201ENST00000391096 64 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 CBX3P9-201ENST00000402326 552 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AL133475.1-201ENST00000404414 305 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AC023141.4-201ENST00000412031 328 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 CYCSP48-201ENST00000417124 323 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AC009963.1-201ENST00000417265 157 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 DBIP2-201ENST00000419076 262 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 RBMY2UP-201ENST00000453474 324 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 HMGN2P16-201ENST00000456802 261 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AC107626.1-201ENST00000471084 183 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 UBE2DNL-203ENST00000474922 222 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 RNU6-426P-201ENST00000516464 97 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 SNORD116-25-201ENST00000516517 92 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AC008011.1-201ENST00000545989 227 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 MIR3124-201ENST00000582636 67 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 AL365361.1-201ENST00000566942 3481 ntBASIC3.72□□□□□ -1.81
FOXQ1Q9C009 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXQ1Q9C009 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.71□□□□□ -1.81
FOXQ1Q9C009 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
FOXQ1Q9C009 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 Y_RNA.182-201ENST00000363880 111 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 RNU6-312P-201ENST00000364629 107 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 RNU4-17P-201ENST00000365598 141 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 SNORA40.19-201ENST00000390846 128 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AL591034.1-201ENST00000407447 340 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 PTGES3P4-201ENST00000426243 356 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC069285.2-201ENST00000440210 275 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 RPS27AP9-201ENST00000477681 438 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC025554.1-201ENST00000505641 188 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 RNA5SP272-201ENST00000516095 111 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 RNA5SP154-201ENST00000516193 111 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AC091152.3-201ENST00000604227 325 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 AL365222.1-201ENST00000614661 98 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
FOXQ1Q9C009 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXQ1Q9C009 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
FOXQ1Q9C009 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXQ1Q9C009 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXQ1Q9C009 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
FOXQ1Q9C009 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXQ1Q9C009 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXQ1Q9C009 Y_RNA.23-201ENST00000362496 106 ntBASIC3.7□□□□□ -1.82
FOXQ1Q9C009 Y_RNA.75-201ENST00000362927 97 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms