Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL357075.2-201ENST00000614906 189 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC091953.5-201ENST00000622919 233 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 U6.106-201ENST00000636360 105 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AL109809.4-201ENST00000603520 2185 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 MFSD8-233ENST00000641482 4860 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 AC135776.4-201ENST00000624300 1904 ntBASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXP3Q9BZS1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RNU6-1285P-201ENST00000363480 105 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RNU5F-3P-201ENST00000363767 117 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.383-201ENST00000383855 97 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RNU6-1289P-201ENST00000384431 106 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 EI24P2-201ENST00000397776 1076 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 MIR548I2-201ENST00000408348 149 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RNA5SP390-201ENST00000410191 113 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RPL19P1-201ENST00000411635 428 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RPL23AP36-201ENST00000413895 458 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 BPY2DP-201ENST00000422208 265 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AC112220.1-201ENST00000434628 355 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 MRPS10P1-201ENST00000448483 130 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RN7SL594P-201ENST00000470590 287 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 RNU6-928P-201ENST00000516876 104 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AC026333.2-201ENST00000542164 106 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AC021739.1-201ENST00000559631 174 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AC010999.1-201ENST00000611856 324 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AC006001.4-201ENST00000622243 395 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 AC132825.6-201ENST00000638861 357 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 ADAM3A-203ENST00000461344 2157 ntBASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
FOXP3Q9BZS1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC110491.1-201ENST00000562191 2010 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RNU6-525P-201ENST00000363685 104 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.170-201ENST00000363746 110 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 SNORD113-1-201ENST00000365321 69 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RNU6-622P-201ENST00000384272 103 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RNU6-918P-201ENST00000391219 106 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.595-201ENST00000410403 105 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC099548.1-201ENST00000421443 426 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC012306.1-201ENST00000423267 114 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC010095.1-201ENST00000443543 144 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AL357552.1-201ENST00000445254 415 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RPL39P29-201ENST00000447779 157 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RPL23AP3-201ENST00000453844 468 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.662-201ENST00000516028 97 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RNU6-1278P-201ENST00000516130 107 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RPL21P9-201ENST00000556149 474 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC233702.2-202ENST00000562547 291 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC090897.2-201ENST00000581715 130 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 MZT1P2-201ENST00000604387 248 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC022441.3-201ENST00000605737 136 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 RNU1-30P-201ENST00000606575 163 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC096577.2-201ENST00000611455 153 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 AC021753.1-201ENST00000635724 168 ntBASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXP3Q9BZS1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 MIR30E-201ENST00000362104 92 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.233-201ENST00000364407 101 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 Y_RNA.240-201ENST00000364469 95 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 RNY1P5-201ENST00000383890 115 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AC138623.1-201ENST00000418060 216 ntBASIC3.67□□□□□ -1.82
FOXP3Q9BZS1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms