Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-799P-201ENST00000363567 107 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-312P-201ENST00000364629 107 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-449P-201ENST00000383914 107 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 MIR147B-201ENST00000390185 80 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 U3.26-201ENST00000391236 204 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 RNU5E-9P-201ENST00000411164 104 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 AL691449.1-201ENST00000426570 421 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 SNRPGP3-201ENST00000469405 227 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 AC005840.1-201ENST00000498412 377 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 SNORA31.1-201ENST00000515993 133 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 SNORA31.5-201ENST00000516190 133 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-966P-201ENST00000516479 104 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 SNORA31.21-201ENST00000517180 77 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 AC009127.3-201ENST00000570531 403 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 MIR3923-201ENST00000579521 83 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 DEFB117-201ENST00000602356 141 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 AC112484.5-201ENST00000624189 228 ntBASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AL161912.2-201ENST00000565707 3007 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 MIR372-201ENST00000362225 67 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.121-201ENST00000363309 113 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 RNU4-17P-201ENST00000365598 141 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-628P-201ENST00000410675 107 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AC009963.1-201ENST00000417265 157 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AL117339.2-201ENST00000430475 180 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AL500522.2-201ENST00000448562 343 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 RN7SL93P-201ENST00000463035 293 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AC006130.2-201ENST00000586202 326 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AL008718.3-201ENST00000610217 321 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 AF127577.6-201ENST00000623352 2191 ntBASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM56Q9BRZ2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.23-201ENST00000362496 106 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.238-201ENST00000364441 102 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 HMGN2P8-201ENST00000391458 268 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RPL21P65-201ENST00000406094 466 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RNU2-51P-201ENST00000410708 197 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-1199P-201ENST00000411249 104 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 TRBV12-2-201ENST00000489763 344 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RNU5F-2P-201ENST00000516066 82 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 AL034555.1-201ENST00000604816 211 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 AL034408.1-202ENST00000636088 415 ntBASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRIM56Q9BRZ2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM56Q9BRZ2 RNU1-18P-201ENST00000363062 164 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-727P-201ENST00000363592 107 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 Y_RNA.357-201ENST00000365487 109 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RNA5SP283-201ENST00000365604 119 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RNU2-49P-201ENST00000410666 184 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RHEBP3-201ENST00000411920 351 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 HMGN2P7-201ENST00000456186 273 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RPS27AP9-201ENST00000477681 438 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RAC1P2-201ENST00000511164 579 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-62P-201ENST00000516526 102 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AC023632.4-201ENST00000517783 191 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AC027176.1-201ENST00000560204 514 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 uc_338.14-201ENST00000613162 166 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 AC084757.4-201ENST00000616350 526 ntBASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM56Q9BRZ2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-1130P-201ENST00000365434 107 ntBASIC3.89□□□□□ -1.79
TRIM56Q9BRZ2 RNU6-1264P-201ENST00000383891 107 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms