Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.64□□□□□ -1.99
NPAS1Q99742 AL353752.1-201ENST00000454946 260 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 RPS3P1-201ENST00000456781 192 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 RNU7-169P-201ENST00000459456 61 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 RPS29P2-201ENST00000479278 136 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 RPL30P10-201ENST00000488148 337 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 AF186996.7-201ENST00000492781 209 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS1Q99742 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.64□□□□□ -1.99
NPAS1Q99742 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS1Q99742 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.64□□□□□ -1.99
NPAS1Q99742 SNRPGP18-201ENST00000553000 214 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 SUB1P3-201ENST00000564581 315 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 AL138963.2-201ENST00000605137 226 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.64□□□□□ -1.99
NPAS1Q99742 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
NPAS1Q99742 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS1Q99742 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS1Q99742 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.63□□□□□ -1.99
NPAS1Q99742 RNU5B-2P-201ENST00000363036 113 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 MIR153-2-201ENST00000385225 87 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 RNU6-308P-201ENST00000390957 107 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AL139095.1-201ENST00000404326 391 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 RNU2-63P-201ENST00000410792 194 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS1Q99742 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.63□□□□□ -1.99
NPAS1Q99742 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS1Q99742 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.63□□□□□ -1.99
NPAS1Q99742 Y_RNA.631-201ENST00000459607 101 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS1Q99742 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS1Q99742 RNU7-4P-201ENST00000516961 62 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 RNU6-586P-201ENST00000517265 104 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AP000889.1-201ENST00000530968 660 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS1Q99742 AC104581.2-201ENST00000572227 430 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AC010928.2-201ENST00000588017 287 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.63□□□□□ -1.99
NPAS1Q99742 AL356280.1-201ENST00000603614 379 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AL355802.3-201ENST00000607571 545 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 RMST_6.1-201ENST00000611980 203 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.63□□□□□ -1.99
NPAS1Q99742 AC008121.3-201ENST00000618726 433 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AC134503.1-201ENST00000633048 54 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 AL450472.1-202ENST00000637286 180 ntBASIC2.63□□□□□ -1.99
NPAS1Q99742 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS1Q99742 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS1Q99742 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.62□□□□□ -1.99
NPAS1Q99742 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS1Q99742 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NPAS1Q99742 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS1Q99742 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS1Q99742 RNU1-109P-201ENST00000383960 147 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 MIR29B2-201ENST00000385055 81 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 SNORA26.3-201ENST00000391119 136 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 MIR190B-201ENST00000401119 79 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AL590004.2-201ENST00000404787 371 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS1Q99742 AC022018.1-201ENST00000430685 241 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AL445687.1-201ENST00000439946 251 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS1Q99742 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS1Q99742 OR2AQ1P-201ENST00000451972 200 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 CYP2C59P-201ENST00000457790 269 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 RNU6-1198P-201ENST00000516904 67 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AC144568.1-201ENST00000520139 137 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS1Q99742 MIR3616-201ENST00000584070 92 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.62□□□□□ -1.99
NPAS1Q99742 AC006157.1-201ENST00000611750 366 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS1Q99742 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
NPAS1Q99742 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS1Q99742 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NPAS1Q99742 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.61□□□□□ -1.99
NPAS1Q99742 AC000403.1-201ENST00000613696 3585 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 RNU4-15P-201ENST00000362613 141 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 U3.9-201ENST00000363823 204 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 SNORD42.2-201ENST00000365570 69 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 SET-203ENST00000372688 801 ntTSL 2 BASIC2.61□□□□□ -1.99
NPAS1Q99742 RNU6-474P-201ENST00000384243 107 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 MIR548P-201ENST00000408336 84 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 Z92545.1-201ENST00000411782 234 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 AL354751.2-201ENST00000415471 210 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 MRPS18CP6-201ENST00000423587 223 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.61□□□□□ -1.99
NPAS1Q99742 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
NPAS1Q99742 AC023442.1-201ENST00000531247 422 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 AL356055.1-201ENST00000602528 446 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 AL355297.2-201ENST00000604792 129 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 uc_338.22-201ENST00000622722 187 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 AL137790.1-201ENST00000634283 177 ntBASIC2.61□□□□□ -1.99
NPAS1Q99742 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.61□□□□□ -1.99
NPAS1Q99742 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms