Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.570-201ENST00000384750 101 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 MIR590-201ENST00000385008 97 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-1093P-201ENST00000391194 107 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL162578.1-201ENST00000406202 378 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU2-11P-201ENST00000459191 187 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-998P-201ENST00000515894 101 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU7-121P-201ENST00000516604 62 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 RNU6-122P-201ENST00000516818 107 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AP001542.2-201ENST00000593141 364 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 AL161629.2-201ENST00000615347 275 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 Z95331.1-201ENST00000623075 23112 ntBASIC1.13□□□□□ -2.23
HMCN1Q96RW7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC1.13□□□□□ -2.23
HMCN1Q96RW7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNORA25.5-201ENST00000363782 126 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNORD27-201ENST00000363981 72 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-690P-201ENST00000365242 106 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RN7SKP51-201ENST00000410781 304 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC078918.1-201ENST00000498515 228 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.660-201ENST00000516002 120 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.721-201ENST00000517207 102 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC025627.2-201ENST00000576220 160 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.53-201ENST00000362765 102 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-163P-201ENST00000384396 106 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MIR196A1-201ENST00000388006 70 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 COX5BP7-201ENST00000414780 274 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-1211P-201ENST00000459179 105 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC107297.1-201ENST00000459991 176 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-475P-201ENST00000516073 104 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNA5SP476-201ENST00000516613 103 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU7-151P-201ENST00000516930 53 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RPL23AP53-201ENST00000521854 457 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNRPGP19-201ENST00000603826 189 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC134503.1-201ENST00000633048 54 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MIR337-201ENST00000362281 93 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.33-201ENST00000362591 102 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-618P-201ENST00000363518 112 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.376-201ENST00000365638 108 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SSXP10-201ENST00000402595 565 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AL024474.1-201ENST00000404655 591 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AL117339.3-201ENST00000418733 162 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AL049610.1-201ENST00000423374 372 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 HMGB1P45-201ENST00000435986 653 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Z82188.1-201ENST00000436709 154 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AL360271.2-201ENST00000447710 161 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 HMGB1P26-201ENST00000452520 628 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC023157.2-201ENST00000540596 141 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC090616.3-201ENST00000582184 217 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AL355812.1-201ENST00000603215 216 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AL683813.2-201ENST00000605245 502 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MIR548BB-201ENST00000626714 66 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC026634.1-201ENST00000634369 198 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC062016.1-201ENST00000355719 319 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-828P-201ENST00000364876 107 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNORA20B-201ENST00000384220 132 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.511-201ENST00000384514 103 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MTCYBP4-201ENST00000401524 249 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RPL23AP76-201ENST00000441860 458 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RPL38P1-201ENST00000460914 211 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms