Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 BNIP3P10-201ENST00000605360 577 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 PCGEM1.1-201ENST00000613431 131 ntBASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.53□□□□□ -2.16
RPRD1AQ96P16 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
RPRD1AQ96P16 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AC092268.1-201ENST00000342691 405 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 Y_RNA.159-201ENST00000363674 87 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 RNU4-56P-201ENST00000364700 142 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 SNORA12.2-201ENST00000391040 156 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 RNU2-41P-201ENST00000410991 178 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 MTCO3P41-201ENST00000414801 328 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 NCOR1P3-201ENST00000420479 303 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 MTCO3P46-201ENST00000425787 232 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 MTND4P32-201ENST00000437189 1237 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 SNRPEP8-201ENST00000442866 260 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 RPS27AP8-201ENST00000452665 445 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AL356010.1-201ENST00000456364 102 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 RNU7-167P-201ENST00000459160 62 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AL137161.1-201ENST00000532231 390 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 MIR3923-201ENST00000579521 83 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.52□□□□□ -2.17
RPRD1AQ96P16 MTATP6P3-201ENST00000581686 676 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AP001836.1-201ENST00000604675 523 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AL512598.1-201ENST00000610158 273 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 AC072046.2-201ENST00000618366 268 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.52□□□□□ -2.17
RPRD1AQ96P16 RNU4-13P-201ENST00000364019 141 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 SNORA36A-201ENST00000384221 132 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 RNU6-378P-201ENST00000384324 107 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 RN7SKP142-201ENST00000411236 328 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 MTATP6P18-201ENST00000417994 673 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC139712.2-201ENST00000424302 339 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 SNRPFP3-201ENST00000457792 225 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC114801.2-201ENST00000503825 781 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC016632.1-201ENST00000503994 196 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC079140.5-201ENST00000507882 310 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC105417.1-201ENST00000514691 285 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 VN1R80P-201ENST00000597126 338 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC068790.2-201ENST00000602601 557 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 Z98751.3-201ENST00000604447 521 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 AC008536.2-201ENST00000607284 349 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 SNORA43.4-201ENST00000629559 138 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 MTND5P9-201ENST00000503854 1755 ntBASIC1.51□□□□□ -2.17
RPRD1AQ96P16 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RPRD1AQ96P16 MTND4P14-201ENST00000435799 1354 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 RNU6-1120P-201ENST00000362988 108 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 RNU6-112P-201ENST00000363599 104 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 U3.9-201ENST00000363823 204 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 SNORA32.2-201ENST00000384049 122 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 RNU6-348P-201ENST00000384386 107 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 Y_RNA.504-201ENST00000384481 104 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AC007547.1-201ENST00000462177 490 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 TOMM22P6-201ENST00000465035 409 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AC097473.1-201ENST00000508142 408 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.5□□□□□ -2.17
RPRD1AQ96P16 RNU6-1098P-201ENST00000516772 96 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AC069113.1-201ENST00000517763 267 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 HIF1AP1-201ENST00000553642 175 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AL391840.1-201ENST00000571144 367 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 AC109347.2-201ENST00000610220 349 ntBASIC1.5□□□□□ -2.17
RPRD1AQ96P16 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPRD1AQ96P16 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 MIR378A-201ENST00000362177 66 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 MTCYBP8-201ENST00000422855 651 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 HMGB1P18-201ENST00000438801 619 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 RN7SKP210-201ENST00000459176 261 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AC021146.2-201ENST00000504736 556 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 MTCO2P4-201ENST00000517968 247 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 MIR5094-201ENST00000578766 85 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.49□□□□□ -2.17
RPRD1AQ96P16 RNU6-85P-201ENST00000605989 107 ntBASIC1.49□□□□□ -2.17
RPRD1AQ96P16 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms