Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 HSPE1P18-201ENST00000517602 280 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 CBX3P8-201ENST00000532412 525 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 MIR3670-1-201ENST00000584160 65 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 MIR3670-3-201ENST00000584855 65 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 MIR3670-4-201ENST00000612260 65 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 AC112487.2-201ENST00000637950 304 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC138Q96M89 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 MIR512-1-201ENST00000384913 84 ntBASIC2.8□□□□□ -1.96
CCDC138Q96M89 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 snoU13.30-201ENST00000458951 104 ntBASIC2.8□□□□□ -1.96
CCDC138Q96M89 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
CCDC138Q96M89 AC132942.1-201ENST00000486753 483 ntBASIC2.8□□□□□ -1.96
CCDC138Q96M89 AC022616.8-201ENST00000533569 253 ntBASIC2.8□□□□□ -1.96
CCDC138Q96M89 AL033523.1-201ENST00000605153 153 ntBASIC2.8□□□□□ -1.96
CCDC138Q96M89 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC138Q96M89 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC138Q96M89 SNORD115-32-201ENST00000364079 82 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 SNORA25B-201ENST00000365507 128 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 RNU6-331P-201ENST00000384724 107 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 SNORA12-201ENST00000391162 147 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 MTCYBP4-201ENST00000401524 249 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 AL049873.1-201ENST00000480540 376 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 RNU7-175P-201ENST00000515915 61 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 RNA5SP384-201ENST00000516615 116 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 RNU6-1213P-201ENST00000517075 94 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 AL590705.4-201ENST00000532209 134 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 RMST_6.1-201ENST00000611980 203 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.79□□□□□ -1.96
CCDC138Q96M89 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCDC138Q96M89 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC138Q96M89 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC138Q96M89 RNU4-73P-201ENST00000363164 141 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 Y_RNA.259-201ENST00000364619 101 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC138Q96M89 RNU6-26P-201ENST00000383985 107 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AL139132.1-201ENST00000431587 344 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 RPL23AP50-201ENST00000434149 455 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 Z82188.1-201ENST00000436709 154 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC011816.1-201ENST00000441346 546 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 Y_RNA.653-201ENST00000459091 95 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AP001486.1-201ENST00000463339 476 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC018868.1-201ENST00000491307 315 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC097473.1-201ENST00000508142 408 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 RAB11AP2-201ENST00000545905 639 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC010928.2-201ENST00000588017 287 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 RPL12P50-201ENST00000603116 116 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 AC133104.2-201ENST00000615272 193 ntBASIC2.78□□□□□ -1.96
CCDC138Q96M89 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC138Q96M89 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 AL355596.1-201ENST00000565399 3996 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 RNU6-310P-201ENST00000384655 107 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 SNORA41-201ENST00000384675 132 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 MIR32-201ENST00000384965 70 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 Y_RNA.646-201ENST00000410980 101 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 RNU6-1304P-201ENST00000411374 106 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 MTCO2P27-201ENST00000420740 428 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 ARL5AP4-201ENST00000430731 512 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 Y_RNA.632-201ENST00000459189 102 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 RPL30P10-201ENST00000488148 337 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 SCARNA16.2-201ENST00000516520 172 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 RNU6-965P-201ENST00000516721 96 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 RNU6-1198P-201ENST00000516904 67 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 RPL17P51-201ENST00000605218 238 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 AC005014.2-201ENST00000607795 599 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 AL137790.1-201ENST00000634283 177 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 MTND4LP32-201ENST00000636111 270 ntBASIC2.77□□□□□ -1.97
CCDC138Q96M89 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC138Q96M89 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms