Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 RNU1-22P-201ENST00000363334 158 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 RNU6-266P-201ENST00000364225 107 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 RNU4-56P-201ENST00000364700 142 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 SNORA26.3-201ENST00000391119 136 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AL031667.1-201ENST00000440222 725 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 FTH1P25-201ENST00000447665 469 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC132479.1-201ENST00000449160 144 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 C1DP4-201ENST00000455429 424 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 RNU1-131P-201ENST00000458943 161 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 MTND3P7-201ENST00000474435 343 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC005741.1-201ENST00000511094 432 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC105417.1-201ENST00000514691 285 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 HSPE1P4-201ENST00000550617 308 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 MIR3913-1-201ENST00000577744 102 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 MIR3945-201ENST00000581853 98 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 MIR3941-201ENST00000582572 103 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 MIR4295-201ENST00000585286 85 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC025449.1-201ENST00000603896 529 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 AC072046.2-201ENST00000618366 268 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
PKNOX2Q96KN3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RNU2-9P-201ENST00000410194 145 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RNA5SP201-201ENST00000410316 124 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RPL23AP95-201ENST00000426806 265 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 MTCO2P11-201ENST00000431069 680 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AL133396.1-201ENST00000432048 687 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 PGBD4P5-201ENST00000445958 426 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AL031274.1-201ENST00000450334 232 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 MTND1P27-201ENST00000451117 902 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RPL39P28-201ENST00000465655 155 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RN7SL429P-201ENST00000479090 223 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RN7SL489P-201ENST00000486185 223 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RN7SL327P-201ENST00000488659 223 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 SNORA25.15-201ENST00000516487 89 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RN7SKP219-201ENST00000516825 296 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RNU6-295P-201ENST00000516901 104 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AP000873.5-201ENST00000533906 236 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 SUB1P2-201ENST00000556401 297 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC015720.1-201ENST00000565251 277 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC145350.1-201ENST00000567426 208 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 MIR3923-201ENST00000579521 83 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 MIR3683-201ENST00000580847 82 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 MIR4298-201ENST00000584380 73 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC005786.1-201ENST00000588553 154 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC068790.2-201ENST00000602601 557 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC012507.3-201ENST00000603556 477 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC109347.2-201ENST00000610220 349 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 RN7SL853P-201ENST00000617250 223 ntBASIC1.41□□□□□ -2.18
PKNOX2Q96KN3 AC092268.1-201ENST00000342691 405 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RNU4-13P-201ENST00000364019 141 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RNU6-827P-201ENST00000365553 106 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AC123900.1-201ENST00000420390 96 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RPS6P15-201ENST00000431996 751 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AL356010.1-201ENST00000456364 102 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AK3P2-201ENST00000507976 429 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RNA5SP404-201ENST00000517118 132 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AC103996.1-201ENST00000555468 102 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 AC109446.1-201ENST00000566172 220 ntBASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PKNOX2Q96KN3 RNU6-903P-201ENST00000391270 109 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AL049545.1-201ENST00000401856 572 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 MTND4P32-201ENST00000437189 1237 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 SNRPFP3-201ENST00000457792 225 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 RNU7-167P-201ENST00000459160 62 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 snoU13.26-201ENST00000459452 105 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC130509.1-201ENST00000464158 433 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC010409.1-201ENST00000487382 476 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC016632.1-201ENST00000503994 196 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 RNU6-430P-201ENST00000517078 107 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC069113.1-201ENST00000517763 267 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AL137161.1-201ENST00000532231 390 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms