Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 snoU13.28-201ENST00000459235 104 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 RN7SL20P-201ENST00000488827 297 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AC022868.1-201ENST00000517767 391 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AC093023.1-201ENST00000547375 507 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 MIR376A1-201ENST00000616574 68 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AL049781.1-201ENST00000623195 3585 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 RNU1-33P-201ENST00000364249 162 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 SNORA36A-201ENST00000384221 132 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 MIR487A-201ENST00000385009 80 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 MRPL35P1-201ENST00000404272 572 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC009969.1-201ENST00000438726 172 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 ACA59.2-201ENST00000517061 156 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 HSPE1P4-201ENST00000550617 308 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC023824.2-201ENST00000566185 400 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 MIR4659A-201ENST00000580269 81 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC010900.2-201ENST00000604508 210 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC011476.5-201ENST00000615594 130 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 MIR6076-201ENST00000617521 113 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 AC073308.1-201ENST00000623696 305 ntBASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHAMP1Q96JM3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AL355596.1-201ENST00000565399 3996 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.237-201ENST00000364439 102 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 SNORA20.1-201ENST00000364790 130 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 RNU6-487P-201ENST00000365430 104 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 SNORD67-201ENST00000390833 111 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 SNORD78.2-201ENST00000391076 69 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 RNU2-64P-201ENST00000411315 191 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AC006028.1-201ENST00000438379 402 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AC096638.1-201ENST00000444678 216 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 Z75741.1-201ENST00000446793 314 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AP000705.1-201ENST00000454567 350 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AC090897.2-201ENST00000581715 130 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 MIR7851-201ENST00000610611 160 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 MIR3529-201ENST00000637713 78 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 ADAM3A-203ENST00000461344 2157 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 AC009487.2-201ENST00000420969 6821 ntBASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHAMP1Q96JM3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RNU6-142P-201ENST00000384019 107 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.478-201ENST00000384358 107 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.539-201ENST00000384635 107 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 MIR10B-201ENST00000385011 110 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 SNORA26.3-201ENST00000391119 136 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AL357075.1-201ENST00000404107 726 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RNA5SP390-201ENST00000410191 113 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RNU2-20P-201ENST00000410425 191 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RPL32P35-201ENST00000415214 394 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AC078809.1-201ENST00000427601 140 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AC004383.1-201ENST00000438135 289 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RPS15AP7-201ENST00000439294 405 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 UQCRHP3-201ENST00000451503 251 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AC010099.1-201ENST00000455434 375 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RPS23P5-201ENST00000495419 428 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AC016632.1-201ENST00000503994 196 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RNU6-1114P-201ENST00000516022 107 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RNU6-111P-201ENST00000517179 105 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 MIR5047-201ENST00000579212 100 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 AC010680.1-201ENST00000590024 3590 ntBASIC3.61□□□□□ -1.83
CHAMP1Q96JM3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.416-201ENST00000384014 113 ntBASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 RNU6-281P-201ENST00000384212 103 ntBASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.6□□□□□ -1.83
CHAMP1Q96JM3 SNORD58.1-201ENST00000391313 66 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms