Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRCH3Q96II8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.77□□□□□ -1.65
LRCH3Q96II8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRCH3Q96II8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.77□□□□□ -1.65
LRCH3Q96II8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRCH3Q96II8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRCH3Q96II8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 LINC01355-201ENST00000566551 5444 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 AL356292.1-201ENST00000283110 373 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 Y_RNA.40-201ENST00000362645 93 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 RNU6-1181P-201ENST00000384191 106 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 MIR1255A-201ENST00000408338 113 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 CKS1BP6-201ENST00000424932 240 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 NDUFB1P1-201ENST00000435191 180 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 PGBD4P5-201ENST00000445958 426 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 RPS26P55-201ENST00000471178 356 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 RNU6-521P-201ENST00000516663 105 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 AC007751.1-201ENST00000529260 376 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 AC105137.2-201ENST00000569073 466 ntBASIC4.76□□□□□ -1.65
LRCH3Q96II8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRCH3Q96II8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.76□□□□□ -1.65
LRCH3Q96II8 AC103988.1-201ENST00000566382 2177 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRCH3Q96II8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRCH3Q96II8 Y_RNA.342-201ENST00000365352 113 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 Y_RNA.500-201ENST00000384466 111 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 MIR1185-2-201ENST00000408687 86 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 Y_RNA.593-201ENST00000410292 98 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 NDUFB4P6-201ENST00000436819 366 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 AP001486.1-201ENST00000463339 476 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 AC083906.5-201ENST00000503722 328 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRCH3Q96II8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRCH3Q96II8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRCH3Q96II8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 AL161912.2-201ENST00000565707 3007 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 AC016588.2-201ENST00000632484 3021 ntBASIC4.75□□□□□ -1.65
LRCH3Q96II8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.75□□□□□ -1.65
LRCH3Q96II8 AL136164.3-201ENST00000624429 3978 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRCH3Q96II8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 SNORA27.1-201ENST00000362604 124 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 RNU6-1305P-201ENST00000364353 104 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 RNA5SP72-201ENST00000364442 117 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 AC107297.1-201ENST00000459991 176 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 RN7SL517P-201ENST00000462240 305 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 AC145146.1-201ENST00000496370 254 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 MIR5009-201ENST00000578736 100 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 AL137067.1-201ENST00000615933 120 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 MIR3202-2-201ENST00000635980 79 ntBASIC4.74□□□□□ -1.65
LRCH3Q96II8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRCH3Q96II8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRCH3Q96II8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.74□□□□□ -1.65
LRCH3Q96II8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRCH3Q96II8 MAPK10-304ENST00000641341 3984 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 RNU6-529P-201ENST00000363383 104 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 Y_RNA.362-201ENST00000365518 110 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 Y_RNA.366-201ENST00000365540 102 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 MIR183-201ENST00000384958 110 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 MIR181B1-201ENST00000385240 110 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 SNORA26-201ENST00000391286 122 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 AC008134.1-201ENST00000420943 193 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 MRPS36P2-201ENST00000512569 299 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms