Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-16P-201ENST00000384385 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-15P-201ENST00000384534 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-2-201ENST00000384627 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-29P-201ENST00000384637 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA1.3-201ENST00000384676 136 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-9-201ENST00000384776 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RPL19P1-201ENST00000411635 428 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RN7SKP210-201ENST00000459176 261 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 AC087477.1-201ENST00000465747 340 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 AC091826.1-201ENST00000514065 313 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 MIR892C-201ENST00000516410 77 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 SNORA64.4-201ENST00000516632 81 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 CYCSP39-201ENST00000565821 309 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 AL162424.1-201ENST00000602325 221 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-6P-201ENST00000606623 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SH3RF3Q8TEJ3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-326P-201ENST00000365480 107 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-1168P-201ENST00000390831 104 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-1154P-201ENST00000391001 104 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AL592148.1-201ENST00000413568 445 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RPL32P35-201ENST00000415214 394 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AL117339.3-201ENST00000418733 162 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AL358453.1-201ENST00000422522 250 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 MTATP6P4-201ENST00000427725 675 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RN7SKP132-201ENST00000516001 208 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 RNU6-313P-201ENST00000516317 112 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AC091144.1-201ENST00000519573 138 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 MIR4659A-201ENST00000580269 81 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AC108706.1-201ENST00000611053 297 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AC097372.5-201ENST00000623665 376 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 Z99571.1-201ENST00000636677 394 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AC008568.2-201ENST00000623862 2313 ntBASIC3.53□□□□□ -1.84
SH3RF3Q8TEJ3 AL035425.3-201ENST00000564206 4996 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.441-201ENST00000384123 112 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 MIR493-201ENST00000385254 89 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 RPS4XP3-201ENST00000398541 413 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AL592045.1-201ENST00000429867 352 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AL031659.1-201ENST00000447075 539 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 RNA5SP310-201ENST00000459084 116 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 UBE2DNL-203ENST00000474922 222 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC083906.5-201ENST00000503722 328 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-1219P-201ENST00000516143 112 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 SNORA70.16-201ENST00000516390 95 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 MIR2355-201ENST00000517199 87 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 GTF3AP2-201ENST00000557014 266 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AL365222.1-201ENST00000614661 98 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
SH3RF3Q8TEJ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 SRP72P2-201ENST00000344851 1979 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AL079305.1-201ENST00000623159 3008 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.82-201ENST00000363000 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.92-201ENST00000363043 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.235-201ENST00000364412 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.275-201ENST00000364726 110 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.306-201ENST00000365015 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.312-201ENST00000365089 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.322-201ENST00000365151 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-1130P-201ENST00000365434 107 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.435-201ENST00000384095 112 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-131P-201ENST00000391144 107 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNU5E-9P-201ENST00000411164 104 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AL356867.1-201ENST00000429623 299 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms